RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RASL11BQ9BPW5 248 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 UQCC2Q9BRT2 126 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 CHCHD3Q9NX63 227 aaKnown RBP12.44□□□□□ -0.42
ERCC1-201ENST00000013807 ETAA1Q9NY74 926 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
ERCC1-201ENST00000013807 GHRLQ9UBU3 117 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 TRAPPC2LQ9UL33 140 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 PEX16Q9Y5Y5 336 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 EFCAB10A6NFE3 127 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 RRP9O43818 475 aaKnown RBP12.43□□□□□ -0.42
ERCC1-201ENST00000013807 HBZP02008 142 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 RCC1P18754 421 aaPredicted RBP12.43□□□□□ -0.42
ERCC1-201ENST00000013807 PSMB8P28062 276 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 F2RL1P55085 397 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 HTD2P86397 168 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 DGCR2P98153 550 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 MORN2Q502X0 79 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 CXorf66Q5JRM2 361 aaPredicted RBP12.43□□□□□ -0.42
ERCC1-201ENST00000013807 C11orf87Q6NUJ2 197 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 UBALD1Q8TB05 177 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 DERL3Q96Q80 235 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 PLCXD1Q9NUJ7 323 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
ERCC1-201ENST00000013807 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
ERCC1-201ENST00000013807 BAG2O95816 211 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 MGMTP16455 207 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 SOX6P35712 828 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 CAPGP40121 348 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 LSAMPQ13449 338 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 FHL3Q13643 280 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 C6orf141Q5SZD1 244 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 NKAIN3Q8N8D7 197 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 OR1L1Q8NH94 360 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 HSPB9Q9BQS6 159 aa12.42□□□□□ -0.42
ERCC1-201ENST00000013807 LSM4Q9Y4Z0 139 aaKnown RBP12.42□□□□□ -0.42
ERCC1-201ENST00000013807 EBAG9O00559 213 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 YPEL1O60688 119 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 OR5H8P0DN80 308 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 CD37P11049 281 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
ERCC1-201ENST00000013807 CD69Q07108 199 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 AWAT2Q6E213 333 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 DHRSXQ8N5I4 330 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 ZFP41Q8N8Y5 198 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 OR5M8Q8NGP6 311 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 YPEL2Q96QA6 119 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 TAF9BQ9HBM6 251 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 PSORS1C1Q9UIG5 152 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 JPT1Q9UK76 154 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 LRRC42Q9Y546 428 aa12.41□□□□□ -0.42
ERCC1-201ENST00000013807 A0A1W2PPK0 400 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 PDCD6O75340 191 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 MAS1P04201 325 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-201ENST00000013807 CELP19835 753 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 MAPK3P27361 379 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-201ENST00000013807 WNT4P56705 351 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 RUNX1Q01196 453 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-201ENST00000013807 LCNL1Q6ZST4 164 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 MRPL30Q8TCC3 161 aaKnown RBP12.4□□□□□ -0.42
ERCC1-201ENST00000013807 CYGBQ8WWM9 190 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 UBE2E2Q96LR5 201 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 WWC2-AS2Q96NR7 200 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 BANF2Q9H503 90 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 OR2S2Q9NQN1 319 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.4□□□□□ -0.42
ERCC1-201ENST00000013807 FKBP14Q9NWM8 211 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
ERCC1-201ENST00000013807 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-201ENST00000013807 IGLV1-40P01703 118 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 VDAC1P21796 283 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 C9orf66Q5T8R8 295 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 RNLSQ5VYX0 342 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 OR10V1Q8NGI7 309 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 KCTD7Q96MP8 289 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
ERCC1-201ENST00000013807 UBE2QL1A1L167 161 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 UBBP0CG47 229 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 C1orf100Q5SVJ3 147 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 FAM71F2Q6NXP2 309 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 PRR18Q8N4B5 295 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 MS4A15Q8N5U1 240 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 NPBQ8NG41 125 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 ABHD14AQ9BUJ0 271 aa12.38□□□□□ -0.43
ERCC1-201ENST00000013807 CST11Q9H112 138 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms