RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Klk15Q8CGR4 254 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr492Q8VFD1 314 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Sec11cQ9D8V7 192 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Trpm7Q923J1 1863 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Togaram1Q6A070 1776 aaKnown RBP10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 KhsrpQ3U0V1 748 aaKnown RBP10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Lefty1Q64280 368 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1014Q7TR95 305 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1013Q7TR96 305 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Foxj3Q8BUR3 623 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr803Q8VFI3 308 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Lgals8Q9JL15 316 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Dock9Q8BIK4 2055 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fam196aQ3USH1 422 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Alkal2Q80UG6 151 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 TMEM229BQ8BFQ2 167 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Utp4Q8R2N2 686 aaKnown RBP10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1044Q8VGR9 314 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tspo2Q9CRZ8 162 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 CN725425A0A087WRU1 652 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fabp4P04117 132 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Q5BN45 167 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1443Q8VFW8 312 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tmem123Q91Z22 195 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Lrp5Q91VN0 1614 aa10.74□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r224E9PWK2 298 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr750E9Q0Z1 331 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Sult2a4L7N245 285 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tnfsf8P32972 239 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Bloc1s3Q5U5M8 195 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Znf235Q61116 645 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc35e3Q6PGC7 313 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gucd1Q8BZI6 239 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Rab40cQ8VHQ4 281 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fyttd1Q91Z49 317 aaKnown RBP10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Hdhd3Q9CYW4 251 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Spta1P08032 2415 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr785A0A0N4SVC3 312 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 E030030I06RikJ3QML9 246 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ccl22O88430 92 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tbxa2rP30987 341 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 VegfbP49766 207 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Col19a1Q0VF58 1136 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Edem2Q8BJT9 577 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Igkv1-135A0A0B4J1H7 120 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Morn1A2RTS7 477 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm21788J3QNH3 180 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 HfeP70387 359 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc16a13Q8CE94 428 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Mmd2Q8R189 247 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1271Q8VG62 305 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tnk1Q99ML2 666 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Tarm1B6A8R8 288 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 H2-T22Q31615 379 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 CebpeQ6PZD9 281 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Adamtsl4Q80T21 1036 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Rps19bp1Q8C6B9 143 aaKnown RBP10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r89Q8R256 316 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr507Q8VG13 316 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 CymB7ZWD6 379 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 FaslgP41047 279 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Spam1P48794 512 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ppp1caP62137 330 aaKnown RBP10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Insm1Q63ZV0 521 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ankrd29D3YVV3 309 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm15293D3YX02 93 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gpr33O88416 339 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 P01798 113 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Pmp2P24526 132 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 RhobP62746 196 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Slc46a1Q6PEM8 459 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr259Q7TS20 312 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Lrp12Q8BUJ9 858 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Rdh9Q8K5C8 317 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr508Q8VG42 310 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Dhrs4Q99LB2 279 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 A0A286YDM5 308 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1024A2ASU7 327 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fgf8P37237 268 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Hmx2P43687 273 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Rnf133Q14B02 382 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Npy6rQ61212 371 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr504Q7TRU7 318 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Mgst1Q91VS7 155 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 OtofQ9ESF1 1997 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fgf20Q9ESL9 211 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Baz2aQ91YE5 1889 aaKnown RBP10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Galr3O88853 370 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Fcgr1P26151 404 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 G6pcP35576 357 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 NovQ64299 354 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1246Q7TQZ6 314 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1495Q8VEZ4 319 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr1450Q8VF19 325 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr51Q8VGG9 307 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr362Q8VGV7 317 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Vmn1r85Q8VIB8 308 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Ptov1Q91VU8 416 aa10.73□□□□□ -0.69
Trim56-201ENSMUST00000054384 Gm20422E9PUR3 255 aa10.72□□□□□ -0.69
Trim56-201ENSMUST00000054384 Olfr288E9Q1P2 318 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms