RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 OR10A7Q8NGE5 316 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 FAM3DQ96BQ1 224 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 RNF114Q9Y508 228 aa13.93□□□□□ -0.18
PHGDH-227ENST00000641811 SMIM30A4D0T7 59 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 SDCBPO00560 298 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-227ENST00000641811 SOCS1O15524 211 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 CA11O75493 328 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 MYL9P24844 172 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 BLVRBP30043 206 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-227ENST00000641811 LOXL3P58215 753 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 KRTAP10-3P60369 221 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 NR2C2APQ86WQ0 139 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 PRR18Q8N4B5 295 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 MRPL30Q8TCC3 161 aaKnown RBP13.92□□□□□ -0.18
PHGDH-227ENST00000641811 WFDC12Q8WWY7 111 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 TXNL4BQ9NX01 149 aaKnown RBP13.92□□□□□ -0.18
PHGDH-227ENST00000641811 STEAP1Q9UHE8 339 aa13.92□□□□□ -0.18
PHGDH-227ENST00000641811 H3BUI4 141 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 PDCD5O14737 125 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 HBZP02008 142 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 GALP22466 123 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 CEACAM3P40198 252 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 PSMD7P51665 324 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 C6orf183Q5T699 404 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 OR51E2Q9H255 320 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 TAF9BQ9HBM6 251 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 RAB18Q9NP72 206 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 GFOD1Q9NXC2 390 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 STUB1Q9UNE7 303 aa13.91□□□□□ -0.18
PHGDH-227ENST00000641811 A0A0B4J203 849 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 TMEM272A0A1B0GTI8 110 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 IFITM5A6NNB3 132 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 SPINT2O43291 252 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 RAB3BP20337 219 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 FGF9P31371 208 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-227ENST00000641811 VEGFCP49767 419 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 PROK1P58294 105 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 LIAT1Q6ZQX7 453 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 SLC16A12Q6ZSM3 486 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 FAM89BQ8N5H3 189 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 OR4C13Q8NGP0 309 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 TOMM40LQ969M1 308 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 CREB3L1Q96BA8 519 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 URM1Q9BTM9 101 aaKnown RBP13.9□□□□□ -0.18
PHGDH-227ENST00000641811 MBNL3Q9NUK0 354 aaKnown RBP13.9□□□□□ -0.18
PHGDH-227ENST00000641811 PLEKHJ1Q9NW61 149 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.18
PHGDH-227ENST00000641811 AMMECR1Q9Y4X0 333 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-227ENST00000641811 FOXI3A8MTJ6 420 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-227ENST00000641811 SLC31A2O15432 143 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 SLC2A2P11168 524 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-227ENST00000641811 BRS3P32247 399 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 EFNB2P52799 333 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 TMEM50BP56557 158 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 Q6ZPA2 131 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 OR10V1Q8NGI7 309 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 OR10X1Q8NGY0 326 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 RPEQ96AT9 228 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 HDHD3Q9BSH5 251 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-227ENST00000641811 NPFFR1Q9GZQ6 430 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 RNF167Q9H6Y7 350 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 KCNIP1Q9NZI2 227 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 GNG12Q9UBI6 72 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 FBLN5Q9UBX5 448 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 SSR3Q9UNL2 185 aa13.89□□□□□ -0.19
PHGDH-227ENST00000641811 GADD45AP24522 165 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 KIR2DS4P43632 304 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 MADCAM1Q13477 382 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-227ENST00000641811 GNMTQ14749 295 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 TRAT1Q6PIZ9 186 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 ARHGAP5-AS1Q96IT6 56 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 ZNF702PQ9H963 129 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 CHMP1AQ9HD42 196 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-227ENST00000641811 AK3Q9UIJ7 227 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 RAB22AQ9UL26 194 aa13.88□□□□□ -0.19
PHGDH-227ENST00000641811 A0A1W2PPI3 338 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 TIMM23O14925 209 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 NAPSAO96009 420 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 CD36P16671 472 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 MNDAP41218 407 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 REG1BP48304 166 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 ZNF134P52741 427 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 BLCAPP62952 87 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 PLAC9Q5JTB6 97 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 Q6ZS46 218 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 ZNF439Q8NDP4 499 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 SETD6Q8TBK2 473 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms