RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 JAGN1Q8N5M9 183 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 LINC00311Q8N616 119 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 OR1L1Q8NH94 360 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 GNG12Q9UBI6 72 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 CLEC2DQ9UHP7 191 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 RYR3Q15413 4870 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 MOSP00540 346 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 MT-ND4P03905 459 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 SLC2A2P11168 524 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-213ENST00000641272 GTF2F2P13984 249 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 GZMHP20718 246 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 CCDC58Q4VC31 144 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 SYT6Q5T7P8 510 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-213ENST00000641272 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 ZNF555Q8NEP9 628 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 ST6GALNAC6Q969X2 333 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 OR14A2Q96R54 314 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 S1PR3Q99500 378 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 BANF2Q9H503 90 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 S100A14Q9HCY8 104 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 PAK1IP1Q9NWT1 392 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-213ENST00000641272 ETAA1Q9NY74 926 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
PHGDH-213ENST00000641272 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
PHGDH-213ENST00000641272 TRBV5-5A0A0J9YX44 114 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 ORC5O43913 435 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 IGFBP3P17936 291 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-213ENST00000641272 MYL12AP19105 171 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 VDAC1P21796 283 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 SLC6A1P30531 599 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 GNMTQ14749 295 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 PNLIPRP3Q17RR3 467 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 GLIPR1L1Q6UWM5 242 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 ZNF439Q8NDP4 499 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 OR8U1Q8NH10 309 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 PLSCR3Q9NRY6 295 aa13.09□□□□□ -0.31
PHGDH-213ENST00000641272 SMPD3Q9NY59 655 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-213ENST00000641272 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
PHGDH-213ENST00000641272 BAG2O95816 211 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 HBZP02008 142 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 DCKP27707 260 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 CD1BP29016 333 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 VHLP40337 213 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 F2RL1P55085 397 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 ADARB1P78563 741 aaKnown RBP13.08□□□□□ -0.32
PHGDH-213ENST00000641272 FOXE3Q13461 319 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 Q499Y3 187 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 AWAT2Q6E213 333 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 RAB12Q6IQ22 244 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
PHGDH-213ENST00000641272 FAM71E2Q8N5Q1 922 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 OR5M8Q8NGP6 311 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 GHSRQ92847 366 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 RCC2Q9P258 522 aaKnown RBP13.08□□□□□ -0.32
PHGDH-213ENST00000641272 CKLFQ9UBR5 152 aa13.08□□□□□ -0.32
PHGDH-213ENST00000641272 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
PHGDH-213ENST00000641272 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 MCRIP1C9JLW8 97 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 OGG1O15527 345 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 SPINT2O43291 252 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 ZNF780AO75290 641 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 MAS1P04201 325 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 RCC1P18754 421 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 FSTP19883 344 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 SOX6P35712 828 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 ECI1P42126 302 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 ZNF134P52741 427 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 RPS11P62280 158 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 CFHR3Q02985 330 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 LSAMPQ13449 338 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 MMDQ15546 238 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 CT45A1Q5HYN5 189 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 C6orf183Q5T699 404 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 DMKNQ6E0U4 476 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 C8orf31Q8N9H6 132 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 CT45A3Q8NHU0 189 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 CYGBQ8WWM9 190 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 PGLYRP3Q96LB9 341 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 SELENOIQ9C0D9 397 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 ZNF107Q9UII5 783 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 DIMT1Q9UNQ2 313 aaKnown RBP13.07□□□□□ -0.32
PHGDH-213ENST00000641272 PEX16Q9Y5Y5 336 aa13.07□□□□□ -0.32
PHGDH-213ENST00000641272 SEC14L6B5MCN3 397 aa13.06□□□□□ -0.32
PHGDH-213ENST00000641272 TXNL1O43396 289 aa13.06□□□□□ -0.32
PHGDH-213ENST00000641272 CRTAPO75718 401 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-213ENST00000641272 ELANEP08246 267 aa13.06□□□□□ -0.32
PHGDH-213ENST00000641272 MGMTP16455 207 aa13.06□□□□□ -0.32
PHGDH-213ENST00000641272 CNTFRP26992 372 aa13.06□□□□□ -0.32
PHGDH-213ENST00000641272 DCTN2Q13561 401 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms