RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FAM90A26D6RGX4 464 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 NDUFA2O43678 99 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF737O75373 536 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 SCGB1D1O95968 90 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 KITLGP21583 273 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 SLC38A11Q08AI6 406 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 STPG1Q5TH74 334 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 C9orf135Q5VTT2 229 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 BTNL8Q6UX41 500 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 GCNT2Q8N0V5 402 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 TCTEX1D1Q8N7M0 179 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 ZBTB34Q8NCN2 500 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 NFAM1Q8NET5 270 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-210ENST00000640652 MMP24Q9Y5R2 645 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 A0A0A6YYD4 124 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 PDE6DO43924 150 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 PTBP3O95758 552 aaKnown RBP4.82□□□□□ -1.64
SCN3A-210ENST00000640652 SERPINA7P05543 415 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 COX6A1P12074 109 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 ATP6V0CP27449 155 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 GALR1P47211 349 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 POLR2GP62487 172 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN3A-210ENST00000640652 FRZBQ92765 325 aa4.82□□□□□ -1.64
SCN3A-210ENST00000640652 LSM10Q969L4 123 aaKnown RBP4.82□□□□□ -1.64
SCN3A-210ENST00000640652 FOXD3Q9UJU5 478 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-210ENST00000640652 MYO18BQ8IUG5 2567 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TIMM8AO60220 97 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 FAM157CP0CG43 387 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 B2MP61769 119 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OR10P1Q8NGE3 313 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OR2I1PQ8NGU4 316 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF385AQ96PM9 386 aaKnown RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 SH3BGRL3Q9H299 93 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TCFL5Q9UL49 500 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 DMBX1Q8NFW5 382 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 MSI2Q96DH6 328 aaKnown RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 CISD1Q9NZ45 108 aaKnown RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 VAX2Q9UIW0 290 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 PITPNC1Q9UKF7 332 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 SLC22A20A6NK97 555 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 SYNGR2O43760 224 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ARG1P05089 322 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 IRF2P14316 349 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 IGSF11Q5DX21 431 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 LCN15Q6UWW0 184 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OR10A7Q8NGE5 316 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 SNX22Q96L94 193 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 PACRGQ96M98 296 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 XKRY2A2RUG3 117 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 PKIAP61925 76 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 RANP62826 216 aaKnown RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 HTD2P86397 168 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 NHLH2Q02577 135 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 C22orf15Q8WYQ4 148 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 DYRK2Q92630 601 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 C18orf12Q96KH6 178 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM56Q96MV1 263 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM56-RWDD3S4R434 201 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 IGKV1-9A0A0C4DH69 117 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 STARD6P59095 220 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM241Q24JQ0 296 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 FFAR4Q5NUL3 377 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF574Q6ZN55 896 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 POC1BQ8TC44 478 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM230Q96A57 120 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM147Q9BVK8 224 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ARV1Q9H2C2 271 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 RNF122Q9H9V4 155 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 GLRX2Q9NS18 164 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 LAMA1P25391 3075 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 A0A1W2PPE2 198 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 MSGN1A6NI15 193 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 C21orf140B9A014 251 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 CHST1O43916 411 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 FOSL1P15407 271 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OTX1P32242 354 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 GLIPR1P48060 266 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 GABRA6Q16445 453 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 RTL8BQ17RB0 113 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 C1orf174Q8IYL3 243 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OR10V1Q8NGI7 309 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 RNF166Q96A37 237 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 FBXO17Q96EF6 278 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ERRFI1Q9UJM3 462 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 H3BP45 60 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 J3QW42 95 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 CYB5R3P00387 301 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-210ENST00000640652 MYF5P13349 255 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 FABP4P15090 132 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 CEACAM6P40199 344 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 OR1C1Q15619 314 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 CNEP1R1Q8N9A8 125 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ABHD3Q8WU67 409 aa4.81□□□□□ -1.64
SCN3A-210ENST00000640652 ACACBO00763 2458 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 OOEPA6NGQ2 149 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SIRPB1O00241 398 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SIGLEC5O15389 551 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms