RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 STUMQ69YW2 141 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 TYW3Q6IPR3 259 aaKnown RBP2.45□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF788Q6ZQV5 615 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 Q6ZRG5 221 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 MRPL21Q7Z2W9 205 aaKnown RBP2.45□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF554Q86TJ5 538 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 RNF113BQ8IZP6 322 aaKnown RBP2.45□□□□□ -2.02
CCDC7-213ENST00000639290 COX18Q8N8Q8 333 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 HSD17B11Q8NBQ5 300 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 DMBX1Q8NFW5 382 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF563Q8TA94 476 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 GPR148Q8TDV2 347 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 H1FXQ92522 213 aaKnown RBP2.45□□□□□ -2.02
CCDC7-213ENST00000639290 RARRES2Q99969 163 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 HINT2Q9BX68 163 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 YTHDF1Q9BYJ9 559 aaKnown RBP2.45□□□□□ -2.02
CCDC7-213ENST00000639290 GOLPH3Q9H4A6 298 aa2.45□□□□□ -2.02
CCDC7-213ENST00000639290 KBTBD11-OT1A0A1B0GTJ5 212 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MEX3AA1L020 520 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 CCDC182A6NF36 153 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 NDUFS6O75380 124 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE7O76087 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 RENP00797 406 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 IGLV2-8P01709 118 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 KLK1P06870 262 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 CD7P09564 240 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ZSCAN5DPP0CG00 497 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE12FP0CL80 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE12GP0CL81 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE12IP0CL82 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF823P16415 610 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 IMPDH1P20839 514 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 AADACP22760 399 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 CD34P28906 385 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 PCBD1P61457 104 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 CRADDP78560 199 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE1Q13065 139 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 GAGE4Q13068 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 PDIA2Q13087 525 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MAPRE2Q15555 327 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MRPL23Q16540 153 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 BEND6Q5SZJ8 279 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 OR52W1Q6IF63 320 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 LCN8Q6JVE9 175 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 EMBQ6PCB8 327 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 C4orf22Q6V702 233 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF767PQ75MW2 155 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 FBXO36Q8NEA4 188 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 OR10A7Q8NGE5 316 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 OR10Z1Q8NGY1 313 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 SLC7A6Q92536 515 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF524Q96C55 264 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ABCG5Q9H222 651 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 PIGUQ9H490 435 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ANKRD19PQ9H560 264 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF581Q9P0T4 197 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 EXOGQ9Y2C4 368 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 IGHV4OR15-8A0A075B7B6 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 A0A087WW49 117 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 TEX48A0A1B0GUV7 120 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 C5orf49A4QMS7 147 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 FAM74A7A6NL05 159 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 OR2A4O95047 310 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ACAA1P09110 424 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 UBCP0CG48 685 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MIFP14174 115 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 H2AFXP16104 143 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 HTR1DP28221 377 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 CSNK1A1P48729 337 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 RBM39Q14498 530 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 FAM74A3Q4VXF1 159 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 PABPC1L2AQ5JQF8 200 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 SEL1L2Q5TEA6 688 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 STEAP1BQ6NZ63 245 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ERI1Q8IV48 349 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 SELENOHQ8IZQ5 122 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 TCTEX1D1Q8N7M0 179 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 C8orf31Q8N9H6 132 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 OR6N1Q8NGY5 312 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 FAM76AQ8TAV0 307 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 FCAMRQ8WWV6 532 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MBOAT4Q96T53 435 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 C6orf62Q9GZU0 229 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 COMMD4Q9H0A8 199 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 SLC38A1Q9H2H9 487 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 Q9H3A6 140 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 ALG9Q9H6U8 611 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 POPDC3Q9HBV1 291 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 IL36GQ9NZH8 169 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 MBD2Q9UBB5 411 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 RPL36Q9Y3U8 105 aaKnown RBP2.44□□□□□ -2.02
CCDC7-213ENST00000639290 USH2AO75445 5202 aa2.44□□□□□ -2.02
CCDC7-213ENST00000639290 IGHV4-28A0A0C4DH34 117 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 NPIPB7O75200 414 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 TMEM50AO95807 157 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 HAND1O96004 215 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 GAPDHP04406 335 aaKnown RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ADORA3P0DMS8 318 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms