RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CA5BP1Q8WTZ4 195 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF845Q96IR2 970 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 SNX22Q96L94 193 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 PRDM14Q9GZV8 571 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 LRFN1Q9P244 771 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 SYNGR1O43759 233 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 CNOT4O95628 575 aaKnown RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 SERPINE2P07093 398 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 CYC1P08574 325 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 METTL15P1P0C7V9 234 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 PNRC1Q12796 327 aaPredicted RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 MRPL30Q8TCC3 161 aaKnown RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 SCGB1C1Q8TD33 95 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF488Q96MN9 340 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 DUSP23Q9BVJ7 150 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF407Q9C0G0 2248 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 TRAPPC2LH3BP13 241 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 PHOX2AO14813 284 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 TRAPPC6AO75865 159 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 FGF5P12034 268 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 IGFBP4P22692 258 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 PLA2G5P39877 138 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 RIPPLY2Q5TAB7 128 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 COLCA1Q6ZS62 124 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 HAPLN4Q86UW8 402 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 AGBL5Q8NDL9 886 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 RDH5Q92781 318 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 RCC1LQ96I51 464 aaKnown RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 ADGRG7Q96K78 797 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 PHF7Q9BWX1 381 aaPredicted RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF576Q9H609 170 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 CACNG5Q9UF02 275 aa9.31□□□□□ -0.92
SNIP1-204ENST00000638725 CHD3Q12873 2000 aaKnown RBP9.31□□□□□ -0.92
SNIP1-204ENST00000638725 A0A096LPE4 126 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 A0A1W2PPZ6 126 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 HS3ST1O14792 307 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 IGKV1-39P01597 117 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 IGKV1D-39P04432 117 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 CTXN2P0C2S0 81 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 ZDHHC23Q8IYP9 409 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF525Q8N782 197 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 KCNE4Q8WWG9 221 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 OR14J1Q9UGF5 321 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 ERRFI1Q9UJM3 462 aaPredicted RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 MRPS17Q9Y2R5 130 aaKnown RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 OR2W1Q9Y3N9 320 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 P04436 131 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 CD55P08174 381 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 CCL4P13236 92 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 FOSL1P15407 271 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 TLE1Q04724 770 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF324BQ6AW86 544 aaPredicted RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 MRPL21Q7Z2W9 205 aaKnown RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 MKXQ8IYA7 352 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 MBD3L1Q8WWY6 194 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 PLK3Q9H4B4 646 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF552Q9H707 407 aaPredicted RBP9.3□□□□□ -0.92
SNIP1-204ENST00000638725 PSENENQ9NZ42 101 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 PI4KAP42356 2102 aa9.3□□□□□ -0.92
SNIP1-204ENST00000638725 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 A0A1B0GV90 55 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 C5orf49A4QMS7 147 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 LRRC3CA6NJW4 275 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SYNGR2O43760 224 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 MDH2P40926 338 aaKnown RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 ELLP55199 621 aaPredicted RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SAXO1Q8IYX7 474 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OR10J5Q8NHC4 309 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SAP25Q8TEE9 199 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 IL1F10Q8WWZ1 152 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 CLDN23Q96B33 292 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 PRDM6Q9NQX0 595 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OR1A1Q9P1Q5 309 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 TRAV39A0A0B4J263 110 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 C9J4A7 227 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 S100GP29377 79 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 DDTP30046 118 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 FOXG1P55316 489 aaPredicted RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 ARF1P84077 181 aaKnown RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 CLN3Q13286 438 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 HNF4GQ14541 408 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 MYPOPQ86VE0 399 aaPredicted RBP9.29□□□□□ -0.92
SNIP1-204ENST00000638725 SPEM1Q8N4L4 309 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 OR1K1Q8NGR3 316 aa9.29□□□□□ -0.92
SNIP1-204ENST00000638725 PRRG4Q9BZD6 226 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms