RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 DHRS3O75911 302 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 CISD3P0C7P0 127 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 ZNF117Q03924 483 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 SLC25A30Q5SVS4 291 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 OR10D3Q8NH80 312 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 ASPDHA6ND91 283 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 OTX1P32242 354 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 FLYWCH2Q96CP2 140 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 TUBA4BQ9H853 241 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 ZNF257Q9Y2Q1 563 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 COL11A2P13942 1736 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 FRG2CA6NGY1 282 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 UBE2CO00762 179 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 DHHO43323 396 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 EPPINO95925 133 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 FGF5P12034 268 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 NOXO1Q8NFA2 376 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 OR1B1Q8NGR6 318 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 AQP10Q96PS8 301 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 DNASE2O00115 360 aaPredicted RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 S1PR2O95136 353 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 NDUFB4O95168 129 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 MPLP40238 635 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 PPP1CAP62136 330 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 TRMT61AQ96FX7 289 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 C14orf144Q96I85 54 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 SLC26A1Q9H2B4 701 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
CACNA1A-242ENST00000637485 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 NGFP01138 241 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 YBX1P67809 324 aaKnown RBP8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 C1orf185Q5T7R7 199 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 DCAF12L2Q5VW00 463 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 C10orf113Q5VZT2 155 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 TMEM178AQ8NBL3 297 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 TIMD4Q96H15 378 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 ZFP64Q9NPA5 681 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 MED29Q9NX70 200 aa8.52□□□□□ -1.04
CACNA1A-242ENST00000637485 A0A087WUJ7 227 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 H3BUT2 72 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 MAS1LP35410 378 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 LYZP61626 148 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 RAE1P78406 368 aaKnown RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 OTPQ5XKR4 325 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 ADAD2Q8NCV1 583 aaKnown RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 CNRIP1Q96F85 164 aaPredicted RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 MRGPRX4Q96LA9 322 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 PLSCR4Q9NRQ2 329 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 MT-CO3P00414 261 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 CYB561P49447 251 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 GNG3P63215 75 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 KIAA0040Q15053 153 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 WNT2BQ93097 391 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 ABHD14BQ96IU4 210 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 A0A1W2PRS3 328 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 NKX2-6A6NCS4 301 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 VSIG10L2P0DP72 767 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 RND3P61587 244 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 TEPPQ6URK8 271 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 KIRREL2Q6UWL6 708 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 MRPL52Q86TS9 123 aaKnown RBP8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 C16orf52Q8NHV5 167 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 CCL4L1Q8NHW4 92 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 PATE1Q8WXA2 126 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 MAP1LC3AQ9H492 121 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 THYN1Q9P016 225 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 KCNE3Q9Y6H6 103 aa8.52□□□□□ -1.05
CACNA1A-242ENST00000637485 SPTY2D1-AS1A0A0U1RR47 76 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 CKS2P33552 79 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 OR3A4PP47883 348 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 PRICKLE4Q2TBC4 344 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 RPS19BP1Q86WX3 136 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 OR2V1Q8NHB1 315 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 VSIG4Q9Y279 399 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 SHROOM3Q8TF72 1996 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 TRAV8-7A0A075B6U6 113 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 A0A087WWC5 75 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 OR11H12B2RN74 326 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 TCF23Q7RTU1 214 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 LYZL2Q7Z4W2 148 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 MPDU1O75352 247 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 SUMO3P55854 103 aaPredicted RBP8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 HIKESHIQ53FT3 197 aa8.51□□□□□ -1.05
CACNA1A-242ENST00000637485 C6orf15Q6UXA7 325 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms