RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IRGMA1A4Y4 181 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 MAGEA13PA6NCF6 341 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 H0YHG0 523 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 AIPO00170 330 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 MOSP00540 346 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 IL3RAP26951 378 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 RPS11P62280 158 aaKnown RBP eCLIP14.51□□□□□ -0.09
CLN6-220ENST00000637450 UNQ9370/PRO34162Q6UXP9 181 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 STX19Q8N4C7 294 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 NEK7Q8TDX7 302 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 RAX2Q96IS3 184 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 S1PR3Q99500 378 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 B9D2Q9BPU9 175 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 GON7Q9BXV9 100 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 DCLRE1BQ9H816 532 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 SPACA1Q9HBV2 294 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 RCC2Q9P258 522 aaKnown RBP14.51□□□□□ -0.09
CLN6-220ENST00000637450 EXOSC1Q9Y3B2 195 aaKnown RBP14.51□□□□□ -0.09
CLN6-220ENST00000637450 RYR3Q15413 4870 aa14.51□□□□□ -0.09
CLN6-220ENST00000637450 TRAV8-7A0A075B6U6 113 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 ZNF736B4DX44 427 aaPredicted RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 C12orf77C9JDV5 145 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 SLC31A2O15432 143 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 RPLP1P05386 114 aaKnown RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 MYL12AP19105 171 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 ZNF134P52741 427 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 CD69Q07108 199 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 Q499Y3 187 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 YIF1BQ5BJH7 314 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 SYT6Q5T7P8 510 aaPredicted RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 SLC25A48Q6ZT89 311 aaKnown RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 ZNF485Q8NCK3 441 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 ZNF439Q8NDP4 499 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 MRPS24Q96EL2 167 aaKnown RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 DUX3Q96PT4 197 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 CKLFQ9UBR5 152 aa14.5□□□□□ -0.09
CLN6-220ENST00000637450 ZMAT5Q9UDW3 170 aaKnown RBP14.5□□□□□ -0.09
CLN6-220ENST00000637450 MCRIP1C9JLW8 97 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 CCL24O00175 119 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 SPINT2O43291 252 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 FSTP19883 344 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 VHLP40337 213 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 CDX1P47902 265 aaPredicted RBP14.49□□□□□ -0.09
CLN6-220ENST00000637450 ZNF137PP52743 207 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 FOXE3Q13461 319 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 GPR50Q13585 617 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 CT45A1Q5HYN5 189 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 GLIPR1L1Q6UWM5 242 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 GAPTQ8N292 157 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 RNF152Q8N8N0 203 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 OR8H1Q8NGG4 311 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 CT45A3Q8NHU0 189 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 MUL1Q969V5 352 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 PGLYRP3Q96LB9 341 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 RASL11BQ9BPW5 248 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 RAB9BQ9NP90 201 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 ETAA1Q9NY74 926 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 TRAPPC2LQ9UL33 140 aa14.49□□□□□ -0.09
CLN6-220ENST00000637450 MRPS28Q9Y2Q9 187 aaKnown RBP14.49□□□□□ -0.09
CLN6-220ENST00000637450 TRBV5-7A0A0A0MS05 114 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 TXNL1O43396 289 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 BAG2O95816 211 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 ELANEP08246 267 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 F2RL1P55085 397 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 GP2P55259 537 aaKnown RBP14.48□□□□□ -0.09
CLN6-220ENST00000637450 DGCR2P98153 550 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
CLN6-220ENST00000637450 KIR2DS1Q14954 304 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 TMEM30BQ3MIR4 351 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 CXorf66Q5JRM2 361 aaPredicted RBP14.48□□□□□ -0.09
CLN6-220ENST00000637450 C6orf183Q5T699 404 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 RAB12Q6IQ22 244 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 LCNL1Q6ZST4 164 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 JAGN1Q8N5M9 183 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 FAM71E2Q8N5Q1 922 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 ZFP41Q8N8Y5 198 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 OR4K15Q8NH41 348 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 CHCHD3Q9NX63 227 aaKnown RBP14.48□□□□□ -0.09
CLN6-220ENST00000637450 GNG12Q9UBI6 72 aa14.48□□□□□ -0.09
CLN6-220ENST00000637450 A0A1W2PPK0 400 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 HBZP02008 142 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 CFHR3Q02985 330 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 MED21Q13503 144 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 STEAP3Q658P3 488 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 CDH26Q8IXH8 852 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 OR10V1Q8NGI7 309 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 OR8U1Q8NH10 309 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 OR1L1Q8NH94 360 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 GGHQ92820 318 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 RBMXL1Q96E39 390 aaKnown RBP14.47□□□□□ -0.09
CLN6-220ENST00000637450 OR14A2Q96R54 314 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 HSPB9Q9BQS6 159 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLN6-220ENST00000637450 PEX16Q9Y5Y5 336 aa14.47□□□□□ -0.09
CLN6-220ENST00000637450 FAM90A10PA6NDY2 464 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 FAM90A7PA6NKC0 464 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 FAM90A23PA8MXZ1 464 aa14.46□□□□□ -0.09
CLN6-220ENST00000637450 RRP9O43818 475 aaKnown RBP14.46□□□□□ -0.09
CLN6-220ENST00000637450 CA11O75493 328 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms