RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 SLC23A3Q6PIS1 610 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 NEK7Q8TDX7 302 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 LSM10Q969L4 123 aaKnown RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 GPHA2Q96T91 129 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 PSMG3Q9BT73 122 aaPredicted RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 RNF150Q9ULK6 438 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 MMP24Q9Y5R2 645 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 COL27A1Q8IZC6 1860 aaPredicted RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 CNTRLQ7Z7A1 2325 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 ZNF727A8MUV8 499 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 B4E171 279 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 DEGS1O15121 323 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 GFRA3O60609 400 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 IFNA5P01569 189 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 CXCL1P09341 107 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 TSPAN7P41732 249 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 CYB561P49447 251 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 ASCL5Q7RTU5 278 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 EDARADDQ8WWZ3 215 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 CALHM2Q9HA72 323 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 TMEM242Q9NWH2 141 aa12.4□□□□□ -0.42
CLN6-215ENST00000636674 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
CLN6-215ENST00000636674 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 IFITM10A6NMD0 228 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 SERPINA7P05543 415 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 RPS18P62269 152 aaKnown RBP12.39□□□□□ -0.43
CLN6-215ENST00000636674 FAM209BQ5JX69 171 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 PCSK5Q92824 1860 aa12.39□□□□□ -0.43
CLN6-215ENST00000636674 C5orf49A4QMS7 147 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 SYNGR1O43759 233 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
CLN6-215ENST00000636674 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 OTX2P32243 289 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 RND2P52198 227 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 C20orf204Q6ZNR8 217 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 OR10J5Q8NHC4 309 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 OR5P3Q8WZ94 311 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 PSMF1Q92530 271 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 PARD6GQ9BYG4 376 aaPredicted RBP12.38□□□□□ -0.43
CLN6-215ENST00000636674 ZNF552Q9H707 407 aaPredicted RBP12.38□□□□□ -0.43
CLN6-215ENST00000636674 DOK5Q9P104 306 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 TINAGQ9UJW2 476 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
CLN6-215ENST00000636674 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 HSPB6O14558 160 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 TGOLN2O43493 480 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 TNFSF12O43508 249 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 SERPINE2P07093 398 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 BCL2P10415 239 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 LHX2P50458 406 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 ZNF674Q2M3X9 581 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 POM121L2Q96KW2 1035 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2AAQ96QV6 131 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 PRRG4Q9BZD6 226 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 PKIBQ9C010 78 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 MPC1Q9Y5U8 109 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
CLN6-215ENST00000636674 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CD300LBA8K4G0 201 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.37□□□□□ -0.43
CLN6-215ENST00000636674 YIF1AO95070 293 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 F10P00742 488 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HLA-HP01893 362 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CFIP05156 583 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CCNOP22674 350 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 ARR3P36575 388 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CEBPGP53567 150 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 MOB1BQ7L9L4 216 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 THNSL2Q86YJ6 484 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 P2RX4Q99571 388 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 ZNF703Q9H7S9 590 aaPredicted RBP12.37□□□□□ -0.43
CLN6-215ENST00000636674 PTPRZ1P23471 2315 aaPredicted RBP12.37□□□□□ -0.43
CLN6-215ENST00000636674 ZNF503-AS2A6NEH8 195 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BKO60814 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 NXPH3O95157 252 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BJP06899 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 PSG2P11465 335 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BOP23527 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BBP33778 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CD200P41217 278 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 CLDN18P56856 261 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BDP58876 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BCP62807 126 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms