RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	ZNF273	Q14593	569 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	RBMS2	Q15434	407 aa	Known RBP	7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	CLEC12B	Q2HXU8	276 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	C17orf58	Q2M2W7	97 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TRIM16L	Q309B1	348 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SCGB2B2	Q4G0G5	96 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	AADACL3	Q5VUY0	350 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	CCBE1	Q6UXH8	406 aa	Predicted RBP	7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	IDO2	Q6ZQW0	420 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	BTN2A1	Q7KYR7	527 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	GLCCI1	Q86VQ1	547 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	LHFPL1	Q86WI0	220 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TMEM17	Q86X19	198 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	OR13C8	Q8NGS7	320 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	OR6F1	Q8NGZ6	308 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TERB2	Q8NHR7	220 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	C8orf46	Q8TAG6	207 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	UBALD1	Q8TB05	177 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	GIMAP1	Q8WWP7	306 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	IL1F10	Q8WWZ1	152 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ARL11	Q969Q4	196 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	MRGPRF	Q96AM1	343 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	GALM	Q96C23	342 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TAS2R3	Q9NYW6	316 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	CALY	Q9NYX4	217 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SCP2D1	Q9UJQ7	156 aa		7.91	□□□□□ -1.14
CACNA1A-223	ENST00000636058	IGHV4-61	A0A0C4DH41	118 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058		A8MXK9	166 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	C22orf46	C9J442	243 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	F2RL2	O00254	374 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	BET1	O15155	118 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	PHF1	O43189	567 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TUSC2	O75896	110 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TCRB	P04435	133 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	HEXA	P06865	529 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SLC25A16	P16260	332 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	NFYA	P23511	347 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ZBTB25	P24278	435 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	IL2RG	P31785	369 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	FCGR2C	P31995	323 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	DLX6	P56179	175 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TMEM30B	Q3MIR4	351 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ESCO2	Q56NI9	601 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	H1FOO	Q8IZA3	346 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	FAM185A	Q8N0U4	392 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	LY6G5B	Q8NDX9	201 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	OR10J5	Q8NHC4	309 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	RFESD	Q8TAC1	157 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	UPRT	Q96BW1	309 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	RAB39B	Q96DA2	213 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ZNF714	Q96N38	554 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	GINS4	Q9BRT9	223 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ZNF2	Q9BSG1	426 aa	Predicted RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	TOLLIP	Q9H0E2	274 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	GAL3ST2	Q9H3Q3	398 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	RAB9B	Q9NP90	201 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	OR1A1	Q9P1Q5	309 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	SLC23A1	Q9UHI7	598 aa		7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	RPUSD1	Q9UJJ7	312 aa	Known RBP	7.9	□□□□□ -1.14
CACNA1A-223	ENST00000636058	ARID1A	O14497	2285 aa		7.9	□□□□□ -1.15
CACNA1A-223	ENST00000636058	KIAA2026	Q5HYC2	2103 aa		7.9	□□□□□ -1.15
CACNA1A-223	ENST00000636058	TACC2	O95359	2948 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	CENPE	Q02224	2701 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	OR5H14	A6NHG9	310 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	PPY	P01298	95 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	ZNF728	P0DKX0	622 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	CCL3L1	P16619	93 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	AADAC	P22760	399 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	OMG	P23515	440 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	FPR2	P25090	351 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	ZFP36	P26651	326 aa	Known RBP	7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	LOXL3	P58215	753 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	CD276	Q5ZPR3	534 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	PLET1	Q6UQ28	207 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	PRSS57	Q6UWY2	283 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	KRTAP1-3	Q8IUG1	177 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	OR10A7	Q8NGE5	316 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	OR52L2P	Q8NGH6	319 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	DACT3	Q96B18	629 aa	Predicted RBP	7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	CREB3L1	Q96BA8	519 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	MOB3A	Q96BX8	217 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	MARVELD1	Q9BSK0	173 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	TMPRSS13	Q9BYE2	586 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	C20orf85	Q9H1P6	137 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	MMP28	Q9H239	520 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	OR2S2	Q9NQN1	319 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	NUDT15	Q9NV35	164 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	RDH8	Q9NYR8	311 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	IDI2-AS1	Q9NZ38	188 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	ZNF69	Q9UC07	566 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	JPT1	Q9UK76	154 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	NUBP2	Q9Y5Y2	271 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	APC	P25054	2843 aa		7.89	□□□□□ -1.15
CACNA1A-223	ENST00000636058	ANKRD17	O75179	2603 aa	Known RBP	7.88	□□□□□ -1.15
CACNA1A-223	ENST00000636058	ABCA12	Q86UK0	2595 aa		7.88	□□□□□ -1.15
CACNA1A-223	ENST00000636058	LOC105371242	A0A075B767	164 aa		7.88	□□□□□ -1.15
CACNA1A-223	ENST00000636058		A0A096LNT2	108 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms