RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 IGHV1OR21-1A0A087WYE8 117 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PLPP3O14495 311 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 RECKO95980 971 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PLAUP00749 431 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 DCTDP32321 178 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 EMP1P54849 157 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 FABP5Q01469 135 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF56Q15929 161 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 GABRA6Q16445 453 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PAQR9Q6ZVX9 377 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 DTX2Q86UW9 622 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ARID1AO14497 2285 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 TRAV30A0A087WSZ9 112 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 TMSB15BA0A087X1C1 80 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 IGHV1OR15-9A0A0B4J2B8 117 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 NDUFA2O43678 99 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 TSPAN13O95857 204 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 CA2P00918 260 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 POLR2IP36954 125 aaKnown RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 RPS20P60866 119 aaKnown RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 C12orf57Q99622 126 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 SMOC1Q9H4F8 434 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PLEKHB1Q9UF11 243 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 EXOGQ9Y2C4 368 aaKnown RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ANKRD36A6QL64 1941 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 GFRA3O60609 400 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ADAP1O75689 374 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 GPX1P07203 203 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 FGF5P12034 268 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PMELP40967 661 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ERVS71-1P61550 626 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF117Q03924 483 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 Q7L0L9 218 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 DYRK2Q92630 601 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 EEF1AKMT3Q96AZ1 226 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 KIR2DL4Q99706 377 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 DIDO1Q9BTC0 2240 aaKnown RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 FOXH1O75593 365 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 SFT2D2O95562 160 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 RPL29P47914 159 aaKnown RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 GCSAMLQ5JQS6 135 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-209ENST00000635750 PHYHIPLQ96FC7 376 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 KLK11Q9UBX7 282 aa4.89□□□□□ -1.63
SCN1A-209ENST00000635750 C9orf170A2RU37 121 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBMY1BA6NDE4 496 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBMY1EA6NEQ0 496 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 B4DEV8 164 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBMY1DP0C7P1 496 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBMY1A1P0DJD3 496 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBMY1CP0DJD4 496 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 PWWP2BQ6NUJ5 590 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 OR5AU1Q8NGC0 362 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 NUBPLQ8TB37 319 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SSMEM1Q8WWF3 244 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM70Q9BUB7 260 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 FGF20Q9NP95 211 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 OR2W1Q9Y3N9 320 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 H7C1H1 209 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 M0QZK8 103 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CDIPTO14735 213 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 GGCTO75223 188 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CFDP00746 253 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 IGHV4-34P06331 123 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 JUNBP17275 347 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 NRN1LQ496H8 165 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 STPG1Q5TH74 334 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 OTPQ5XKR4 325 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 UNQ5815/PRO19632Q6UWF5 114 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LRP10Q7Z4F1 713 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ABHD3Q8WU67 409 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 GATA6Q92908 595 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SFRP2Q96HF1 295 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 MEGF10Q96KG7 1140 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RTN4RQ9BZR6 473 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 MAP1LC3AQ9H492 121 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 AUNIPQ9H7T9 357 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 METTL1Q9UBP6 276 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DOCK9Q9BZ29 2069 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 MYOFQ9NZM1 2061 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 FCMRO60667 390 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CD99P14209 185 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TCL1AP56279 114 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LSM6P62312 80 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CFAP161Q6P656 301 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 FAM159AQ6UWV7 190 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SH2D5Q6ZV89 423 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DOCK7Q96N67 2140 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SYT11Q9BT88 431 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CISD1Q9NZ45 108 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 PLXNB2O15031 1838 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CEACAM18A8MTB9 384 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ZBTB42B2RXF5 422 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms