RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HSPB7Q9UBY9 170 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 NUP50Q9UKX7 468 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 METTL21EPA6NDL7 271 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 DISC1C4P0D8 188 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 FCER2P06734 321 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 GATA3P23771 443 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 CDAP32320 146 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF121P58317 390 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 HIST1H3AP68431 136 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 PLP2Q04941 152 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 C10orf128Q5T292 105 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 HIST2H3PS2Q5TEC6 136 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF660Q6AZW8 331 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RFPL4BQ6ZWI9 263 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 HIST2H3AQ71DI3 136 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 SLC16A14Q7RTX9 510 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 TRAPPC6BQ86SZ2 158 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RTN4RL2Q86UN3 420 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR4S1Q8NGB4 309 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR5D14Q8NGL3 314 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR13C9Q8NGT0 318 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR10R2Q8NGX6 335 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR51E1Q8TCB6 317 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM54Q969K7 222 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF416Q9BWM5 594 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 LINC00470Q9BZP3 86 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 LPAR5Q9H1C0 372 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 FN3KRPQ9HA64 309 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 FXYD6-FXYD2A0A087WZ82 144 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 NPIPB5A8MRT5 1133 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 CEACAM18A8MTB9 384 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 FOXI3A8MTJ6 420 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 I3L521 148 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 SLC25A4P12235 298 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 SELLP14151 372 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF14P17017 642 aaPredicted RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 GCH1P30793 250 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ARPC4P59998 168 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RAB14P61106 215 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 LSM6P62312 80 aaKnown RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 UBA52P62987 128 aaKnown RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF345Q14585 488 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 CDNFQ49AH0 187 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 SLC22A6Q4U2R8 563 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RNASE10Q5GAN6 216 aaKnown RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 CLVS2Q5SYC1 327 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 GSG1LQ6UXU4 331 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 PGAP1Q75T13 922 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 LYG2Q86SG7 212 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 GVQW1Q8N7I0 195 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 OR1J1Q8NGS3 322 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 NUDCD2Q8WVJ2 157 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RAB1CQ92928 201 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 RBPMSQ93062 196 aaKnown RBP4.03□□□□□ -1.76
LINC00550-201ENST00000629293 FXYD6Q9H0Q3 95 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 MSL2Q9HCI7 577 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 GPR84Q9NQS5 396 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 KCNK7Q9Y2U2 307 aa4.03□□□□□ -1.76
LINC00550-201ENST00000629293 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM89A2RUT3 159 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OR2AT4A6NND4 320 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 RER1O15258 196 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 QDPRP09417 244 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF20P17024 532 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ZP3P21754 424 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OTX1P32242 354 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 APLNRP35414 380 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF93P35789 620 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CX3CR1P49238 355 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GRB2P62993 217 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 BAMBIQ13145 260 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PPP1R1AQ13522 171 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ENDOGQ14249 297 aaKnown RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 GK2Q14410 553 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 SGCAQ16586 387 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 PLAC9Q5JTB6 97 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C17orf107Q6ZR85 190 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 TMED4Q7Z7H5 227 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CCDC36Q8IYA8 594 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C20orf196Q8IYI0 205 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 OR2AJ1Q8NGZ0 328 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 LRRC20Q8TCA0 184 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MITD1Q8WV92 249 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 NABP1Q96AH0 204 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CXorf58Q96LI9 332 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 NICN1Q9BSH3 213 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 ARL6Q9H0F7 186 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 CST11Q9H112 138 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MMP26Q9NRE1 261 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1W2PRX2 142 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 C9orf170A2RU37 121 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 DBX1A6NMT0 343 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 A8MXK9 166 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 RPL36A-HNRNPH2H7BZ11 118 aa4.02□□□□□ -1.77
LINC00550-201ENST00000629293 MFNGO00587 321 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms