RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.02□□□□□ -0.49
PNKP-221ENST00000627317 MBNL3Q9NUK0 354 aaKnown RBP12.02□□□□□ -0.49
PNKP-221ENST00000627317 IDI2-AS1Q9NZ38 188 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 TRBV6-6A0A0A6YYG2 114 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 A0A1W2PRD5 423 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 A0A1W2PRF3 423 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 A0A1W2PRM7 423 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 C12orf77C9JDV5 145 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 RNASEK-C17orf49H0YIS7 233 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 RGS5O15539 181 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 MMP23AO75900 390 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 CGB3P0DN86 165 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 CGB7P0DN87 165 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 NFYBP25208 207 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 MNDAP41218 407 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 BRD3OSQ6XYD6 125 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 ZNF554Q86TJ5 538 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 IZUMO1Q8IYV9 350 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 PNKDQ8N490 385 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 UBALD1Q8TB05 177 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 ZFAND2BQ8WV99 257 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 DGCR14Q96DF8 476 aaKnown RBP12.01□□□□□ -0.49
PNKP-221ENST00000627317 KIRREL1Q96J84 757 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
PNKP-221ENST00000627317 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 LINC00574Q9H8X3 128 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 TAF9BQ9HBM6 251 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 ADAM30Q9UKF2 790 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
PNKP-221ENST00000627317 FAM172BPA6NC97 362 aa12□□□□□ -0.49
PNKP-221ENST00000627317 POM121CA8CG34 1229 aa12□□□□□ -0.49
PNKP-221ENST00000627317 NPIPB11E5RHQ5 1161 aa12□□□□□ -0.49
PNKP-221ENST00000627317 C15orf65H3BRN8 121 aa12□□□□□ -0.49
PNKP-221ENST00000627317 XRCC3O43542 346 aa12□□□□□ -0.49
PNKP-221ENST00000627317 HBZP02008 142 aa12□□□□□ -0.49
PNKP-221ENST00000627317 ELK1P19419 428 aa12□□□□□ -0.49
PNKP-221ENST00000627317 FPR2P25090 351 aa12□□□□□ -0.49
PNKP-221ENST00000627317 GDNFP39905 211 aa12□□□□□ -0.49
PNKP-221ENST00000627317 UBE2E1P51965 193 aa12□□□□□ -0.49
PNKP-221ENST00000627317 BPIFB3P59826 476 aa12□□□□□ -0.49
PNKP-221ENST00000627317 PITPNAQ00169 270 aa12□□□□□ -0.49
PNKP-221ENST00000627317 PNLIPRP3Q17RR3 467 aa12□□□□□ -0.49
PNKP-221ENST00000627317 TMEM30BQ3MIR4 351 aa12□□□□□ -0.49
PNKP-221ENST00000627317 ZNF260Q3ZCT1 412 aa12□□□□□ -0.49
PNKP-221ENST00000627317 HACD4Q5VWC8 232 aa12□□□□□ -0.49
PNKP-221ENST00000627317 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
PNKP-221ENST00000627317 ZNF880Q6PDB4 577 aa12□□□□□ -0.49
PNKP-221ENST00000627317 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
PNKP-221ENST00000627317 DTX3Q8N9I9 347 aa12□□□□□ -0.49
PNKP-221ENST00000627317 OR10A7Q8NGE5 316 aa12□□□□□ -0.49
PNKP-221ENST00000627317 MCFD2Q8NI22 146 aa12□□□□□ -0.49
PNKP-221ENST00000627317 ZNF418Q8TF45 676 aaPredicted RBP12□□□□□ -0.49
PNKP-221ENST00000627317 NUDCD2Q8WVJ2 157 aa12□□□□□ -0.49
PNKP-221ENST00000627317 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
PNKP-221ENST00000627317 SLIRPQ9GZT3 109 aaKnown RBP12□□□□□ -0.49
PNKP-221ENST00000627317 ZNF69Q9UC07 566 aa12□□□□□ -0.49
PNKP-221ENST00000627317 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 SDCBPO00560 298 aaPredicted RBP11.99□□□□□ -0.49
PNKP-221ENST00000627317 NPFFO15130 113 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 FCGR3AP08637 254 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 TAS2R20P59543 309 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 HMGN3Q15651 99 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 C9orf139Q6ZV77 190 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 LAX1Q8IWV1 398 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 OR1L1Q8NH94 360 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 C22orf15Q8WYQ4 148 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 AUNIPQ9H7T9 357 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 Q9N2K0 584 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 GNG12Q9UBI6 72 aa11.99□□□□□ -0.49
PNKP-221ENST00000627317 ELF5Q9UKW6 265 aaPredicted RBP11.99□□□□□ -0.49
PNKP-221ENST00000627317 F2RL2O00254 374 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 ARG1P05089 322 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 DTYMKP23919 212 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 LGALS4P56470 323 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 FOXB2Q5VYV0 432 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 Q6ZPA2 131 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 ABHD12Q8N2K0 398 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 ZDHHC22Q8N966 263 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 OR52M1Q8NGK5 317 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 IL1F10Q8WWZ1 152 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 GALMQ96C23 342 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 EXTL2Q9UBQ6 330 aa11.98□□□□□ -0.49
PNKP-221ENST00000627317 MRPS7Q9Y2R9 242 aaKnown RBP11.98□□□□□ -0.49
PNKP-221ENST00000627317 IGHV3-43A0A0B4J1X8 118 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 MEIOCA2RUB1 952 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 CTDSP2O14595 271 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 TOR1AO14656 332 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 IGHV3-43DP0DP04 118 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 CD34P28906 385 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 SAA4P35542 130 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 GNG10P50151 68 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms