RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	FUCA1	P04066	466 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	COX6C	P09669	75 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	UNQ5815/PRO19632	Q6UWF5	114 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	LINC01465	Q8N7H1	131 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	STPG3	Q8N7X2	389 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	CCL13	Q99616	98 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	TTTY12	Q9BZ98	90 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	CXorf1	O96002	111 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	PITPNC1	Q9UKF7	332 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	SMCHD1	A6NHR9	2005 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	PAPPA2	Q9BXP8	1791 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	TCRBV5S2	A0A599	114 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	LINC01555	Q8NAE3	123 aa		12.16	□□□□□ -0.46
NRXN1-222	ENST00000625672	LAMB1	P07942	1786 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	TMEM189	A5PLL7	270 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	RAE1	P78406	368 aa	Known RBP	12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	HLA-DRB3	P79483	266 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	TMEM255A	Q5JRV8	349 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	PAXX	Q9BUH6	204 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	NDUFB6	O95139	128 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	CT62	P0C5K7	136 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	PNLIP	P16233	465 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	SLC25A53	Q5H9E4	307 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	OR2T10	Q8NGZ9	312 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	PRO1933	Q9H354	126 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672		Q9N2K0	584 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	TMEM38B	Q9NVV0	291 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	SCN2A	Q99250	2005 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	RBFOX3	A6NFN3	312 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	AP4M1	O00189	453 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	CBLN3	Q6UW01	205 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	CALHM1	Q8IU99	346 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	FAM24B	Q8N5W8	94 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	OR1K1	Q8NGR3	316 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	FAM60A	Q9NP50	221 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	BPIFA4P	Q86YQ2	179 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	TP53RK	Q96S44	253 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	hCG_38984	A0A1B0GV85	526 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	PIGY	Q3MUY2	71 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	MEIG1	Q5JSS6	88 aa		12.15	□□□□□ -0.46
NRXN1-222	ENST00000625672	IGHV3OR16-10	A0A075B7F0	116 aa		12.15	□□□□□ -0.47
NRXN1-222	ENST00000625672	NTN1	O95631	604 aa		12.15	□□□□□ -0.47
NRXN1-222	ENST00000625672	RPLP1	P05386	114 aa	Known RBP	12.15	□□□□□ -0.47
NRXN1-222	ENST00000625672	GAB4	Q2WGN9	574 aa		12.15	□□□□□ -0.47
NRXN1-222	ENST00000625672	PRR13	Q9NZ81	148 aa		12.15	□□□□□ -0.47
NRXN1-222	ENST00000625672	NUDT3	O95989	172 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	MBP	P02686	304 aa	Predicted RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PRSS2	P07478	247 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	CIRBP	Q14011	172 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	C11orf91	Q3C1V1	193 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	UCN2	Q96RP3	112 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	MRPS18B	Q9Y676	258 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	TCRBV5S1A1T	A0A578	114 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	LIPT2	A6NK58	231 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	CTGF	P29279	349 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PRDX2	P32119	198 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	LSM6	P62312	80 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	GPA33	Q99795	319 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	WIPI2	Q9Y4P8	454 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	TRAV39	A0A0B4J263	110 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	HYPM	O75409	117 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	MPV17L	Q2QL34	196 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	ALX3	O95076	343 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	SNRPC	P09234	159 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PDLIM4	P50479	330 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PDE6D	O43924	150 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	HOXB3	P14651	431 aa	Predicted RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	INSL4	Q14641	139 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	OR4A47	Q6IF82	309 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	SLC35E3	Q7Z769	313 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	DYRK2	Q92630	601 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PHYHIPL	Q96FC7	376 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	TMEM30A	Q9NV96	361 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	RALY	Q9UKM9	306 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	MRPS16	Q9Y3D3	137 aa	Known RBP	12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	CCL28	Q9NRJ3	127 aa		12.14	□□□□□ -0.47
NRXN1-222	ENST00000625672	PLPP2	O43688	288 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	YIPF6	Q96EC8	236 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	OR2V2	Q96R30	315 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	CHRNA10	Q9GZZ6	450 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	SLC52A3	Q9NQ40	469 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	ATP5G2	Q06055	141 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	BSX	Q3C1V8	233 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	RIMKLA	Q8IXN7	391 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	OR13C6P	Q8NH95	151 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	COPS9	Q8WXC6	57 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	ABHD14B	Q96IU4	210 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672		J3QT63	122 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	IGKV3-20	P01619	116 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	NAT2	P11245	290 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	LINC00596	Q86U02	117 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	MZB1	Q8WU39	189 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	ZDHHC8	Q9ULC8	765 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	MPC2	O95563	127 aa		12.13	□□□□□ -0.47
NRXN1-222	ENST00000625672	HOXD4	P09016	255 aa	Predicted RBP	12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms