RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ZNF324BQ6AW86 544 aaPredicted RBP15.06■□□□□ 0
PCF11-207ENST00000624931 CLEC18CQ8NCF0 446 aa15.06■□□□□ 0
PCF11-207ENST00000624931 OR5L1Q8NGL2 311 aa15.06■□□□□ 0
PCF11-207ENST00000624931 CPT1CQ8TCG5 803 aa15.06■□□□□ 0
PCF11-207ENST00000624931 CYYR1Q96J86 154 aa15.06■□□□□ 0
PCF11-207ENST00000624931 TMEM222Q9H0R3 208 aa15.06■□□□□ 0
PCF11-207ENST00000624931 SH3BGRL3Q9H299 93 aa15.06■□□□□ 0
PCF11-207ENST00000624931 NCOA6Q14686 2063 aaPredicted RBP15.06■□□□□ 0
PCF11-207ENST00000624931 TRAV20A0A0B4J274 112 aa15.06■□□□□ 0
PCF11-207ENST00000624931 NRASP01111 189 aa15.06■□□□□ 0
PCF11-207ENST00000624931 PATE4P0C8F1 98 aa15.06■□□□□ 0
PCF11-207ENST00000624931 DAOP14920 347 aa15.06■□□□□ 0
PCF11-207ENST00000624931 FUT3P21217 361 aa15.06■□□□□ 0
PCF11-207ENST00000624931 ATP6V0CP27449 155 aa15.06■□□□□ 0
PCF11-207ENST00000624931 S100A2P29034 98 aa15.06■□□□□ 0
PCF11-207ENST00000624931 TLE4Q04727 773 aa15.06■□□□□ 0
PCF11-207ENST00000624931 KRTAP27-1Q3LI81 207 aa15.06■□□□□ 0
PCF11-207ENST00000624931 ZNF506Q5JVG8 444 aa15.06■□□□□ 0
PCF11-207ENST00000624931 SLC35E3Q7Z769 313 aa15.06■□□□□ 0
PCF11-207ENST00000624931 DPPA2Q7Z7J5 298 aa15.06■□□□□ 0
PCF11-207ENST00000624931 RPRMLQ8N4K4 120 aa15.06■□□□□ 0
PCF11-207ENST00000624931 SLC35G3Q8N808 338 aa15.06■□□□□ 0
PCF11-207ENST00000624931 OR10AD1Q8NGE0 317 aa15.06■□□□□ 0
PCF11-207ENST00000624931 OR1F12Q8NHA8 337 aa15.06■□□□□ 0
PCF11-207ENST00000624931 FGFBP3Q8TAT2 258 aa15.06■□□□□ 0
PCF11-207ENST00000624931 FBXO17Q96EF6 278 aa15.06■□□□□ 0
PCF11-207ENST00000624931 FOXB1Q99853 325 aa15.06■□□□□ 0
PCF11-207ENST00000624931 LYRM2Q9NU23 88 aaPredicted RBP15.06■□□□□ 0
PCF11-207ENST00000624931 PARPBPQ9NWS1 579 aa15.06■□□□□ 0
PCF11-207ENST00000624931 PUS1Q9Y606 427 aaKnown RBP eCLIP15.06■□□□□ 0
PCF11-207ENST00000624931 ZNF729A6NN14 1252 aaPredicted RBP15.05■□□□□ -0
PCF11-207ENST00000624931 SYNGR3O43761 229 aa15.05■□□□□ -0
PCF11-207ENST00000624931 SS18L1O75177 396 aaPredicted RBP15.05■□□□□ -0
PCF11-207ENST00000624931 PPP1CCP36873 323 aaKnown RBP15.05■□□□□ -0
PCF11-207ENST00000624931 FHITP49789 147 aa15.05■□□□□ -0
PCF11-207ENST00000624931 OR2B8PP59922 312 aa15.05■□□□□ -0
PCF11-207ENST00000624931 OR8G1Q15617 311 aa15.05■□□□□ -0
PCF11-207ENST00000624931 SNAI3Q3KNW1 292 aa15.05■□□□□ -0
PCF11-207ENST00000624931 RIPPLY2Q5TAB7 128 aa15.05■□□□□ -0
PCF11-207ENST00000624931 ZNF695Q8IW36 515 aa15.05■□□□□ -0
PCF11-207ENST00000624931 IL22RA2Q969J5 263 aa15.05■□□□□ -0
PCF11-207ENST00000624931 TVP23CQ96ET8 276 aa15.05■□□□□ -0
PCF11-207ENST00000624931 LINC00470Q9BZP3 86 aa15.05■□□□□ -0
PCF11-207ENST00000624931 TINAGQ9UJW2 476 aa15.05■□□□□ -0
PCF11-207ENST00000624931 DOCK7Q96N67 2140 aa15.04■□□□□ -0
PCF11-207ENST00000624931 H3BQ15 152 aa15.04■□□□□ -0
PCF11-207ENST00000624931 ANGPTL7O43827 346 aa15.04■□□□□ -0
PCF11-207ENST00000624931 PPYP01298 95 aa15.04■□□□□ -0
PCF11-207ENST00000624931 SRP19P09132 144 aaKnown RBP15.04■□□□□ -0
PCF11-207ENST00000624931 RPS10P46783 165 aaKnown RBP15.04■□□□□ -0
PCF11-207ENST00000624931 TDGF1P3P51864 188 aa15.04■□□□□ -0
PCF11-207ENST00000624931 UBE2KP61086 200 aa15.04■□□□□ -0
PCF11-207ENST00000624931 ARF1P84077 181 aaKnown RBP15.04■□□□□ -0
PCF11-207ENST00000624931 SP5Q6BEB4 398 aaPredicted RBP15.04■□□□□ -0
PCF11-207ENST00000624931 SPSB3Q6PJ21 355 aa15.04■□□□□ -0
PCF11-207ENST00000624931 CLEC9AQ6UXN8 241 aa15.04■□□□□ -0
PCF11-207ENST00000624931 SEM1Q6ZVN7 128 aa15.04■□□□□ -0
PCF11-207ENST00000624931 GMPPAQ96IJ6 420 aaPredicted RBP15.04■□□□□ -0
PCF11-207ENST00000624931 ELOA3CA0A087WX78 387 aaPredicted RBP15.03■□□□□ -0
PCF11-207ENST00000624931 A0A096LPE4 126 aa15.03■□□□□ -0
PCF11-207ENST00000624931 A0A1W2PPZ6 126 aa15.03■□□□□ -0
PCF11-207ENST00000624931 SEC14L6B5MCN3 397 aa15.03■□□□□ -0
PCF11-207ENST00000624931 ZNF587BE7ETH6 402 aa15.03■□□□□ -0
PCF11-207ENST00000624931 SPRY1O43609 319 aaPredicted RBP15.03■□□□□ -0
PCF11-207ENST00000624931 C1QL1O75973 258 aa15.03■□□□□ -0
PCF11-207ENST00000624931 CTXN2P0C2S0 81 aa15.03■□□□□ -0
PCF11-207ENST00000624931 AADACP22760 399 aa15.03■□□□□ -0
PCF11-207ENST00000624931 TAGLN2P37802 199 aaKnown RBP15.03■□□□□ -0
PCF11-207ENST00000624931 PCBD1P61457 104 aa15.03■□□□□ -0
PCF11-207ENST00000624931 GTF3C1Q12789 2109 aa15.03■□□□□ -0
PCF11-207ENST00000624931 FOXF2Q12947 444 aa15.03■□□□□ -0
PCF11-207ENST00000624931 KHDC3LQ587J8 217 aa15.03■□□□□ -0
PCF11-207ENST00000624931 TMEM252Q8N6L7 170 aa15.03■□□□□ -0
PCF11-207ENST00000624931 ZNF610Q8N9Z0 462 aa15.03■□□□□ -0
PCF11-207ENST00000624931 GGACTQ9BVM4 153 aa15.03■□□□□ -0
PCF11-207ENST00000624931 TREM2Q9NZC2 230 aa15.03■□□□□ -0
PCF11-207ENST00000624931 ST3GAL6Q9Y274 331 aa15.03■□□□□ -0
PCF11-207ENST00000624931 UBE2J1Q9Y385 318 aaPredicted RBP15.03■□□□□ -0
PCF11-207ENST00000624931 IGKV1-27A0A075B6S5 117 aa15.03■□□□□ -0
PCF11-207ENST00000624931 TRAV1-1A0A0B4J248 108 aa15.03■□□□□ -0
PCF11-207ENST00000624931 OR6C6A6NF89 314 aa15.03■□□□□ -0
PCF11-207ENST00000624931 FAM24AA6NFZ4 105 aa15.03■□□□□ -0
PCF11-207ENST00000624931 GEMIN2O14893 280 aaKnown RBP15.03■□□□□ -0
PCF11-207ENST00000624931 DFFBO76075 338 aa15.03■□□□□ -0
PCF11-207ENST00000624931 LCATP04180 440 aa15.03■□□□□ -0
PCF11-207ENST00000624931 DBHP09172 617 aa15.03■□□□□ -0
PCF11-207ENST00000624931 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
PCF11-207ENST00000624931 IL24Q13007 206 aa15.03■□□□□ -0
PCF11-207ENST00000624931 GUSBP1Q15486 140 aa15.03■□□□□ -0
PCF11-207ENST00000624931 DMRTC1Q5HYR2 192 aa15.03■□□□□ -0
PCF11-207ENST00000624931 AKR1C8PQ5T2L2 129 aa15.03■□□□□ -0
PCF11-207ENST00000624931 VWA1Q6PCB0 445 aa15.03■□□□□ -0
PCF11-207ENST00000624931 CNEP1R1Q8N9A8 125 aa15.03■□□□□ -0
PCF11-207ENST00000624931 Q8NFD4 153 aa15.03■□□□□ -0
PCF11-207ENST00000624931 SNRNP40Q96DI7 357 aaKnown RBP15.03■□□□□ -0
PCF11-207ENST00000624931 NIPSNAP3BQ9BS92 247 aa15.03■□□□□ -0
PCF11-207ENST00000624931 FAM215AQ9Y5M1 114 aa15.03■□□□□ -0
PCF11-207ENST00000624931 TLN1Q9Y490 2541 aaKnown RBP15.02■□□□□ -0
PCF11-207ENST00000624931 NKX2-6A6NCS4 301 aa15.02□□□□□ -0.01
PCF11-207ENST00000624931 AHRRA9YTQ3 701 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms