RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 K7ESF4 209 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 FCGR3BO75015 233 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 SP1P08047 785 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 PMELP40967 661 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 DEFA6Q01524 100 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 KCNMB1Q16558 191 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TPRX1Q8N7U7 411 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 SLC25A40Q8TBP6 338 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 IL17BQ9UHF5 180 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 CADP27708 2225 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 MYO7BQ6PIF6 2116 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TSTD3H0UI37 97 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
MSH6-215ENST00000622629 HLA-DRB3P79483 266 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TMEM41BQ5BJD5 291 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 BIVMQ86UB2 503 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 C15orf54Q8N8G6 183 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TMEM105Q8N8V8 129 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
MSH6-215ENST00000622629 TRAV17A0A0B4J275 112 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 EIF3GO75821 320 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSH6-215ENST00000622629 F2RP25116 425 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 CIB3Q96Q77 187 aaPredicted RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 S1PR3Q99500 378 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 V9GYS6 101 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 CD200P41217 278 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 NCMAPQ5T1S8 102 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 PINX1Q96BK5 328 aaKnown RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 C21orf140B9A014 251 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 SYNGR3O43761 229 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 ENSAO43768 121 aaKnown RBP11.07□□□□□ -0.64
MSH6-215ENST00000622629 SLC25A6P12236 298 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 PLGLAQ15195 96 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 ATP5SQ99766 215 aa11.07□□□□□ -0.64
MSH6-215ENST00000622629 TMEM187Q14656 261 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 MSI2Q96DH6 328 aaKnown RBP11.06□□□□□ -0.64
MSH6-215ENST00000622629 KIAA1671Q9BY89 1806 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 SHANK1Q9Y566 2161 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 LRRC29Q8WV35 223 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 TM2D1Q9BX74 207 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 FBLN5Q9UBX5 448 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 ZNF98A6NK75 572 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 SP9P0CG40 484 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 CTRB1P17538 263 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 EIF2S3P41091 472 aaKnown RBP11.06□□□□□ -0.64
MSH6-215ENST00000622629 MEOX2P50222 304 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 TRIP6Q15654 476 aaKnown RBP11.06□□□□□ -0.64
MSH6-215ENST00000622629 CTRB2Q6GPI1 263 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 SIGLEC12Q96PQ1 595 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 RSG1Q9BU20 258 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 SAMD10Q9BYL1 202 aa11.06□□□□□ -0.64
MSH6-215ENST00000622629 ZNF552Q9H707 407 aaPredicted RBP11.06□□□□□ -0.64
MSH6-215ENST00000622629 H3BQ15 152 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 CYTIPO60759 359 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 KLF7O75840 302 aaPredicted RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 AESQ08117 197 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 ACOT6Q3I5F7 207 aaPredicted RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 RNF212Q495C1 297 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 ATP1A1-AS1Q5TC04 95 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 SCCPDHQ8NBX0 429 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 ATP23Q9Y6H3 246 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 TRAV20A0A0B4J274 112 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 hCG_38984A0A1B0GV85 526 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 HAND1O96004 215 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 RAB5AP20339 215 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 AQP7O14520 342 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 HLA-GP17693 338 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 MDH2P40926 338 aaKnown RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 SRSF3P84103 164 aaKnown RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 NUFIP2Q7Z417 695 aaKnown RBP11.05□□□□□ -0.64
MSH6-215ENST00000622629 OR4A4PQ8NGN8 299 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 TOLLIPQ9H0E2 274 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 RPH3ALQ9UNE2 315 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 CLDN34H7C241 214 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 CA11O75493 328 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 MBP02144 154 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 ZNF818PQ6ZRF7 136 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 C22orf15Q8WYQ4 148 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 TAAR6Q96RI8 345 aa11.05□□□□□ -0.64
MSH6-215ENST00000622629 OBSL1O75147 1896 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 IGLV3-32A0A0A0MS00 114 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 OR5H1A6NKK0 313 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 ZNF737O75373 536 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms