RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 A0A0G2JNG1 304 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 KIR2DS3K7RE56 304 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TRAF3IP2O43734 574 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 BGLAPP02818 100 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 H2BFMP0C1H6 154 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 GABRG2P18507 467 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 EMP2P54851 167 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TAS2R30P59541 319 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ARG2P78540 354 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 KIR2DS5Q14953 304 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 MEP1BQ16820 701 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 EMC4Q5J8M3 183 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF440Q8IYI8 595 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 SLC22A24Q8N4F4 322 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 OR11L1Q8NGX0 322 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 MMABQ96EY8 250 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ATP6V0BQ99437 205 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 PLEKHF2Q9H8W4 249 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 PATZ1Q9HBE1 687 aaKnown RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 LAMA1P25391 3075 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 LOC101059948A0A1B0GTJ6 334 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 LRRC3CA6NJW4 275 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 C10orf142B7Z368 130 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TRAPPC2LH3BP13 241 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 GALR2O43603 387 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 GDF9O60383 454 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 LMX1BO60663 402 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 RENP00797 406 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ISG15P05161 165 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 REG1AP05451 166 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 DBHP09172 617 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ADMP35318 185 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 GFERP55789 205 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 LINC00310P59036 64 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 YPEL5P62699 121 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ROM1Q03395 351 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TLE3Q04726 772 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 DLX2Q07687 328 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM187Q14656 261 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 COX15Q7KZN9 410 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ABHD12BQ7Z5M8 362 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 SAMD10Q9BYL1 202 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF665Q9H7R5 613 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 MOB1AQ9H8S9 216 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 DECR2Q9NUI1 292 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 FBXL7Q9UJT9 491 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 TP53TG3Q9ULZ0 132 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 PCDH15Q96QU1 1955 aa6.46□□□□□ -1.37
TRIM49B-202ENST00000622138 FREM3P0C091 2139 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 KIF26BQ2KJY2 2108 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 IGLV1-36A0A0B4J1U3 117 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 A0A1B0GUS0 222 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 IGSF23A1L1A6 192 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 SIRPB1O00241 398 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 TAX1BP3O14907 124 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 NPIPB7O75200 414 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF253O75346 499 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 MPZL1O95297 269 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 GLB1P16278 677 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 CTLA4P16410 223 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 CSNK2A1P68400 391 aaPredicted RBP6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 Q0VG73 95 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 SQSTM1Q13501 440 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 MARCH3Q86UD3 253 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 RTN4RL2Q86UN3 420 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 SIGLECL1Q8N7X8 197 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 CSNK2A3Q8NEV1 391 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 OR10W1Q8NGF6 305 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 OR2I1PQ8NGU4 316 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 ASB10Q8WXI3 467 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 C8orf44Q96CB5 159 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 C18orf12Q96KH6 178 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 LRRC61Q9BV99 259 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 NAA60Q9H7X0 242 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 B9D1Q9UPM9 204 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 CEP290O15078 2479 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 THADAQ6YHU6 1953 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 BRWD1Q9NSI6 2320 aa6.46□□□□□ -1.38
TRIM49B-202ENST00000622138 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 SAA2-SAA4A0A096LPE2 208 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 SPTY2D1-AS1A0A0U1RR47 76 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 LOC107986453A0A1B0GWG9 222 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 M0R296 226 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 SERF1AO75920 110 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 HLA-DQA2P01906 255 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 SERPINA7P05543 415 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 PPIAL4GP0DN37 164 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 IL11P20809 199 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 CLDN15P56746 228 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 PMCHL1Q16048 86 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 ACKR1Q16570 336 aa6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 PTCRAQ6ISU1 281 aaPredicted RBP6.45□□□□□ -1.38
TRIM49B-202ENST00000622138 SLC18B1Q6NT16 456 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms