RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DCSTAMPQ9H295 470 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 ABRACLQ9P1F3 81 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 HOXA3O43365 443 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-217ENST00000621474 IGHV3-7P01780 117 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 HBZP02008 142 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 NFYBP25208 207 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 SPCS2Q15005 226 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 HMGN3Q15651 99 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 TAF9BQ9HBM6 251 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.6□□□□□ -0.55
CBWD3-217ENST00000621474 IGHV3-43A0A0B4J1X8 118 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 FBP1P09467 338 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 IGHV3-43DP0DP04 118 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 IER3P46695 156 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 SLC9A3R2Q15599 337 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 FAM189A2Q15884 450 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 ZNF554Q86TJ5 538 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 PRR18Q8N4B5 295 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 RAB2BQ8WUD1 216 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 MEGF9Q9H1U4 602 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 C12orf4Q9NQ89 552 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 PSG11Q9UQ72 335 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
CBWD3-217ENST00000621474 COL6A5A8TX70 2615 aa11.59□□□□□ -0.55
CBWD3-217ENST00000621474 A0A075B6Q4 140 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 TMBIM6P55061 237 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 UBA52P62987 128 aaKnown RBP11.58□□□□□ -0.56
CBWD3-217ENST00000621474 BAMBIQ13145 260 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 DYNC1I2Q13409 638 aaKnown RBP11.58□□□□□ -0.56
CBWD3-217ENST00000621474 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 OR52M1Q8NGK5 317 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 CMSS1Q9BQ75 279 aaKnown RBP11.58□□□□□ -0.56
CBWD3-217ENST00000621474 RBM38Q9H0Z9 239 aaKnown RBP11.58□□□□□ -0.56
CBWD3-217ENST00000621474 ABCG5Q9H222 651 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 Q9N2K0 584 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 FAM96BQ9Y3D0 163 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 CEPT1Q9Y6K0 416 aa11.58□□□□□ -0.56
CBWD3-217ENST00000621474 SERPINE3A8MV23 424 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 H3BMQ9 156 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 CLDN34H7C241 214 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 J3QR06 171 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 SDCBPO00560 298 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-217ENST00000621474 IGHV4-59P01825 116 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 RBMS3Q6XE24 437 aaKnown RBP11.57□□□□□ -0.56
CBWD3-217ENST00000621474 ZNF439Q8NDP4 499 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 OR9G1Q8NH87 305 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 ZNF596Q8TC21 504 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 ISOC1Q96CN7 298 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 KCTD12Q96CX2 325 aaKnown RBP11.57□□□□□ -0.56
CBWD3-217ENST00000621474 BCL7BQ9BQE9 202 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 RIMS4Q9H426 269 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-217ENST00000621474 A0A1W2PPE3 182 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 TMEM235A6NFC5 223 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 BUB1B-PAK6H3BSN5 160 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 SPINT2O43291 252 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 FCGR3AP08637 254 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 GNG10P50151 68 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 RORCP51449 518 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 ZNF134P52741 427 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 LGALS4P56470 323 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 GNMTQ14749 295 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 SSX2Q16385 188 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 CDNFQ49AH0 187 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 MINOS1Q5TGZ0 78 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 SAMD12Q8N8I0 201 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 PIFOQ8TCI5 191 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 JMJD8Q96S16 334 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 MDFIQ99750 246 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 CHIAQ9BZP6 476 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 MMP28Q9H239 520 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 CHMP1AQ9HD42 196 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-217ENST00000621474 MINOS1-NBL1R4GNA1 71 aa11.57□□□□□ -0.56
CBWD3-217ENST00000621474 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 POM121CA8CG34 1229 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 SLC31A2O15432 143 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 SCGNO76038 276 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
CBWD3-217ENST00000621474 SCTP09683 121 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 HTR1DP28221 377 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 HTD2P86397 168 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 DIAPH2-AS1Q14236 149 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 HERPUD1Q15011 391 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 UBE2NLQ5JXB2 153 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 HACD4Q5VWC8 232 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 MOB1BQ7L9L4 216 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 OR52L2PQ8NGH6 319 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 DYNC2LI1Q8TCX1 351 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 SSMEM1Q8WWF3 244 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms