RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 HYDINQ4G0P3 5121 aa9□□□□□ -0.97
CPNE3-210ENST00000621245 TRBV5-5A0A0J9YX44 114 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 PNMA8CA0A1B0GUJ8 204 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 SHISA3A0PJX4 238 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 TMEM30CPA0ZSE6 113 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 M0QZK8 103 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 CCRL2O00421 344 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 SDCBPO00560 298 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 OGG1O15527 345 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 MPZL2O60487 215 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 IGHG2P01859 326 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 BDKRB2P30411 391 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF93P35789 620 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 VHLP40337 213 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 RAB7AP51149 207 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF816Q0VGE8 651 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 MRPL28Q13084 256 aaKnown RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 LAIR2Q6ISS4 152 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 RPL22L1Q6P5R6 122 aaKnown RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 SLC35E3Q7Z769 313 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 MOB3BQ86TA1 216 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 IZUMO1Q8IYV9 350 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 OR8H3Q8N146 312 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 STPG2Q8N412 459 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 Q8N9W7 124 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF439Q8NDP4 499 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 KLHL30-AS1Q8NEE0 82 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 OR10V1Q8NGI7 309 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ARL11Q969Q4 196 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ST6GALNAC6Q969X2 333 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 SMIM19Q96E16 107 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF184Q99676 751 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-210ENST00000621245 HSPB9Q9BQS6 159 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 TMEM138Q9NPI0 162 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 PLSCR3Q9NRY6 295 aa8.99□□□□□ -0.97
CPNE3-210ENST00000621245 H3BUI4 141 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 MAGEB3O15480 346 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 FGF16O43320 207 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 MT-ND4P03905 459 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 CPEP16870 476 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 GPR12P47775 334 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 KCNJ3P48549 501 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 ZNF134P52741 427 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 EBI3Q14213 229 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 GNMTQ14749 295 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 KLHL22Q53GT1 634 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 ATAD3CQ5T2N8 411 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 DMKNQ6E0U4 476 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-210ENST00000621245 OR4K15Q8NH41 348 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-210ENST00000621245 GHSRQ92847 366 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 MUL1Q969V5 352 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 OR14A2Q96R54 314 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 P2RX4Q99571 388 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 METTL9Q9H1A3 318 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 PCDHB16Q9NRJ7 776 aa8.98□□□□□ -0.97
CPNE3-210ENST00000621245 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-210ENST00000621245 RCC2Q9P258 522 aaKnown RBP8.98□□□□□ -0.97
CPNE3-210ENST00000621245 TRBV5-7A0A0A0MS05 114 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 NUDT19A8MXV4 375 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 AIPO00170 330 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 BAG2O95816 211 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CD2P06729 351 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 RCC1P18754 421 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 LUMP51884 338 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 F2RL1P55085 397 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 PPP3R1P63098 170 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 ADARB1P78563 741 aaKnown RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CFHR3Q02985 330 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 RIPK1Q13546 671 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 INSL4Q14641 139 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 LRRC36Q1X8D7 754 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CCDC58Q4VC31 144 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CT45A1Q5HYN5 189 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 DEFB121Q5J5C9 76 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 SIGIRRQ6IA17 410 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 LYPD6Q86Y78 171 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 PRR18Q8N4B5 295 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 LINC00311Q8N616 119 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 OR10A7Q8NGE5 316 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CT45A3Q8NHU0 189 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 NEK7Q8TDX7 302 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CHPT1Q8WUD6 406 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 CPNE2Q96FN4 548 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 KCNK15Q9H427 330 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 BANF2Q9H503 90 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 BABAM2Q9NXR7 383 aa8.97□□□□□ -0.97
CPNE3-210ENST00000621245 SMPD3Q9NY59 655 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 DIMT1Q9UNQ2 313 aaKnown RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 EPPK1P58107 5090 aaKnown RBP8.97□□□□□ -0.97
CPNE3-210ENST00000621245 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.98
CPNE3-210ENST00000621245 HBZP02008 142 aa8.96□□□□□ -0.98
CPNE3-210ENST00000621245 CSTBP04080 98 aaKnown RBP8.96□□□□□ -0.98
CPNE3-210ENST00000621245 GAPDHP04406 335 aaKnown RBP8.96□□□□□ -0.98
CPNE3-210ENST00000621245 GNAO1P09471 354 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms