RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 DNAJB11Q9UBS4 358 aa8.42□□□□□ -1.06
VTA1-205ENST00000620996 TRAV14DV4A0A0A6YYC5 116 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 KIR2DS1A0A191URI9 304 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 PHF1O43189 567 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 TNFSF12O43508 249 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 HAND1O96004 215 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 IFNA4P05014 189 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 OR5AC1P0C628 307 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 S100A11P31949 105 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 KIR2DS4P43632 304 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 KLF3P57682 345 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 IL13RA2Q14627 380 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 KIR2DS1Q14954 304 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 SURF2Q15527 256 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 ZNF324BQ6AW86 544 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 LDLRAD3Q86YD5 345 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 PDZD9Q8IXQ8 264 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 KIRREL1Q96J84 757 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 ZFP57Q9NU63 452 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 TMEM210A6NLX4 147 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 TRDCB7Z8K6 153 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 FGF2P09038 288 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 PGA5P0DJD9 388 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 UNQ6494/PRO21346Q6UXR6 183 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 C22orf34Q6ZV56 151 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 LINC00596Q86U02 117 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 PUSL1Q8N0Z8 303 aaKnown RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 INO80EQ8NBZ0 244 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 Q8NFD4 153 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 MRPL30Q8TCC3 161 aaKnown RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 LRRC29Q8WV35 223 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 SLC5A7Q9GZV3 580 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 SLC2A9Q9NRM0 540 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 RCC2Q9P258 522 aaKnown RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 CHD8Q9HCK8 2581 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 NCOR2Q9Y618 2525 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 ZNF729A6NN14 1252 aaPredicted RBP8.41□□□□□ -1.06
VTA1-205ENST00000620996 C16orf97H3BN30 126 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 IFNA21P01568 189 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 FBP1P09467 338 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 NQO2P16083 231 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 NFYBP25208 207 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 AKR1C3P42330 323 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 UCNP55089 124 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 SELENOVP59797 346 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 C11orf87Q6NUJ2 197 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 NRIP2Q9BQI9 281 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 TAAR3PQ9P1P4 343 aa8.41□□□□□ -1.06
VTA1-205ENST00000620996 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
VTA1-205ENST00000620996 SLC31A2O15432 143 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 GABRA2P47869 451 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 EDDM3AQ14507 147 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 IAH1Q2TAA2 248 aaPredicted RBP8.4□□□□□ -1.06
VTA1-205ENST00000620996 ZNF660Q6AZW8 331 aaPredicted RBP8.4□□□□□ -1.06
VTA1-205ENST00000620996 DHRS11Q6UWP2 260 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 OR10J5Q8NHC4 309 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 OR10C1Q96KK4 312 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 NAA60Q9H7X0 242 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 RASL12Q9NYN1 266 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 KCNS2Q9ULS6 477 aa8.4□□□□□ -1.06
VTA1-205ENST00000620996 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 SLC33A1O00400 549 aaPredicted RBP8.4□□□□□ -1.07
VTA1-205ENST00000620996 NAPSAO96009 420 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 KITLGP21583 273 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 PSMB6P28072 239 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 DHODHQ02127 395 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 NCMAPQ5T1S8 102 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 TPRX1Q8N7U7 411 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 CCDC71LQ8N9Z2 235 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 MOB3AQ96BX8 217 aa8.4□□□□□ -1.07
VTA1-205ENST00000620996 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 KANTRA0A1W2PQU2 76 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 CRYM-AS1A6NIL9 109 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 Q6P435 159 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 MOGAT3Q86VF5 341 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 MRPL24Q96A35 216 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 C14orf144Q96I85 54 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 OR2V2Q96R30 315 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 RAB18Q9NP72 206 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 UBE2J1Q9Y385 318 aaPredicted RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 LSM5Q9Y4Y9 91 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 ATP23Q9Y6H3 246 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 NBASA2RRP1 2371 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 CEACAM18A8MTB9 384 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 HLA-DRB3P79483 266 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 AESQ08117 197 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 HERPUD1Q15011 391 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 LTC4SQ16873 150 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 FAM76BQ5HYJ3 339 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 MBNL2Q5VZF2 373 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 WDR82Q6UXN9 313 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 OR1S1Q8NH92 325 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 RNASE11Q8TAA1 199 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 RND1Q92730 232 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms