RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 Q6ZRM9 215 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 COLCA1Q6ZS62 124 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 SAXO1Q8IYX7 474 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 C17orf78Q8N4C9 275 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 NEK7Q8TDX7 302 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 P2RX4Q99571 388 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 LRFN1Q9P244 771 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 OR14J1Q9UGF5 321 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 TNRC6AQ8NDV7 1962 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 OPN1MWP04001 364 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 OPN1MW2P0DN77 364 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 OPN1MW3P0DN78 364 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 MDKP21741 143 aaPredicted RBP16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 GPM6AP51674 278 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 ARL16Q0P5N6 197 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNF880Q6PDB4 577 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNF525Q8N782 197 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 SCGB1C1Q8TD33 95 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 MEGF10Q96KG7 1140 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 PSMG3Q9BT73 122 aaPredicted RBP16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 CABLES2Q9BTV7 478 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 MTCH1Q9NZJ7 389 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 WDFY3Q8IZQ1 3526 aa16.71■□□□□ 0.26
PDLIM3-212ENST00000620787 IFNA10P01566 189 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 PSG2P11465 335 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 IL2RGP31785 369 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 C20orf204Q6ZNR8 217 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 HAPLN4Q86UW8 402 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 OR51H1Q8NH63 302 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 OR5R1Q8NH85 324 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 MRPL30Q8TCC3 161 aaKnown RBP16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNF407Q9C0G0 2248 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 PITPNC1Q9UKF7 332 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 KIAA2026Q5HYC2 2103 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 CNOT4O95628 575 aaKnown RBP16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 PAX1P15863 534 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 SRD5A2P31213 254 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 COL19A1Q14993 1142 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNF324BQ6AW86 544 aaPredicted RBP16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 SSX9Q7RTT3 188 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 CTDSP1Q9GZU7 261 aa16.7■□□□□ 0.26
PDLIM3-212ENST00000620787 A0A087X0M5 115 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 A0A1B0GX30 115 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 SMCO3A2RU48 225 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 TSTD3H0UI37 97 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 RNF224P0DH78 156 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 MLF1P58340 268 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 WDR25Q64LD2 544 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 OR4X1Q8NH49 305 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 KCNE4Q8WWG9 221 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 VAX2Q9UIW0 290 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 RNF150Q9ULK6 438 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 CEBPZOSA8MTT3 80 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 C9J4A7 227 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 ZNHIT1O43257 154 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 IGKV1-39P01597 117 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 IGKV1D-39P04432 117 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 MDH2P40926 338 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 ACSF3Q4G176 576 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 ADGRG7Q96K78 797 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 REPIN1Q9BWE0 567 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 OR2W1Q9Y3N9 320 aa16.69■□□□□ 0.26
PDLIM3-212ENST00000620787 SERPINE2P07093 398 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 METTL15P1P0C7V9 234 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 IAPPP10997 89 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 TMEM183AQ8IXX5 376 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 OR10A7Q8NGE5 316 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 OR10D3Q8NH80 312 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 CACNG5Q9UF02 275 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 PI4KAP42356 2102 aa16.68■□□□□ 0.26
PDLIM3-212ENST00000620787 SYNGR2O43760 224 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 KLF7O75840 302 aaPredicted RBP16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 FGF5P12034 268 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 S100GP29377 79 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 LRRC75BQ2VPJ9 315 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 CEACAM21Q3KPI0 293 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 MRGPRGQ86SM5 289 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 TRAPPC2LH3BP13 241 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 CD55P08174 381 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 EPHA8P29322 1005 aaPredicted RBP16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 CLN3Q13286 438 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 ZDHHC23Q8IYP9 409 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 RNASE11Q8TAA1 199 aaKnown RBP16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 SRD5A3Q9H8P0 318 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 PSENENQ9NZ42 101 aa16.67■□□□□ 0.26
PDLIM3-212ENST00000620787 SERF2P84101 59 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 TMEM41BQ5BJD5 291 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 CLDN23Q96B33 292 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 DUSP23Q9BVJ7 150 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 RBKSQ9H477 322 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 SMOC1Q9H4F8 434 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 TRBV6-6A0A0A6YYG2 114 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 MAP1LC3B2A6NCE7 125 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 SYNGR1O43759 233 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 IGHV3-9P01782 118 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 WNT2P09544 360 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 RFPL3SP0C7P2 107 aa16.66■□□□□ 0.26
PDLIM3-212ENST00000620787 JOSD1Q15040 202 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms