RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RAB32Q13637 225 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 OR2D3Q8NGH3 330 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 PRSS54Q6PEW0 395 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 RHNO1Q9BSD3 238 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 A6NJY4 79 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 SYNGR2O43760 224 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 LOXL3P58215 753 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 MMDQ15546 238 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 SHISA5Q8N114 240 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 OR10D4PQ8NGN7 298 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 WDR34Q96EX3 536 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 LCTP09848 1927 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 HMSDA8MTL9 139 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 GEMIN2O14893 280 aaKnown RBP9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 HLA-DRB3P79483 266 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 TNFRSF12AQ9NP84 129 aa9.82□□□□□ -0.84
CCDC144B-208ENST00000618081 A0A1B0GU03 582 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF343Q6P1L6 599 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 SLC23A3Q6PIS1 610 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ANGPTL4Q9BY76 406 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CA11O75493 328 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CSN3P07498 182 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 SCGB1A1P11684 91 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 METAP1P53582 386 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ST3GAL2Q16842 350 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 STPG3Q8N7X2 389 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 HIGD1AQ9Y241 93 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ARFGEF3Q5TH69 2177 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 GBF1Q92538 1859 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 APELAP0DMC3 54 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 P2RX4Q99571 388 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 OR51B2Q9Y5P1 312 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 DAOP14920 347 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 GZMKP49863 264 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 TFF2Q03403 129 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 LBHQ53QV2 105 aaPredicted RBP9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 FBXW9Q5XUX1 488 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ABHD3Q8WU67 409 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 PARP11Q9NR21 331 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 VAX2Q9UIW0 290 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 OR2W1Q9Y3N9 320 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 SRSF10O75494 262 aaKnown RBP9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CTGFP29279 349 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 C1orf185Q5T7R7 199 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CALHM1Q8IU99 346 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 OR2H1Q9GZK4 316 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF107Q9UII5 783 aaPredicted RBP9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 GLI3P10071 1580 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 CHRNA10Q9GZZ6 450 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 EDIL3O43854 480 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF205O95201 554 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 HIST3H3Q16695 136 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 WBP1LQ9NX94 342 aa9.81□□□□□ -0.84
CCDC144B-208ENST00000618081 IFNL4K9M1U5 179 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 APCSP02743 223 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF714Q96N38 554 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 LPAR2Q9HBW0 351 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF735P0CB33 412 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 SELENOPP49908 381 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 TMEM33P57088 247 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 LAMTOR1Q6IAA8 161 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 OR8A1Q8NGG7 326 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 HIKESHIQ53FT3 197 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 ZFP36L2P47974 494 aaKnown RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 C16orf47Q6ZP98 133 aaPredicted RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 SF3B6Q9Y3B4 125 aaKnown RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 IGHV3OR15-7A0A075B7D8 119 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 TRAV34A0A0B4J273 112 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 PPYP01298 95 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 FGF11Q92914 225 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 MSL2Q9HCI7 577 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 FSCN3Q9NQT6 498 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 COL6A6A6NMZ7 2263 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 PATE4P0C8F1 98 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 LIFP15018 202 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 ERVS71-1P61550 626 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 RPP25Q9BUL9 199 aaKnown RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 CHST1O43916 411 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 MPZL1O95297 269 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 CELA2BP08218 269 aaPredicted RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 TAS2R60P59551 318 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
CCDC144B-208ENST00000618081 J3QR06 171 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 CEBPDP49716 269 aaPredicted RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 POLR2GP62487 172 aaKnown RBP eCLIP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms