RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 SFT2D2O95562 160 aa17.35■□□□□ 0.37
CNTNAP3B-212ENST00000617422 SPIN3Q5JUX0 258 aa17.35■□□□□ 0.37
CNTNAP3B-212ENST00000617422 LRRC29Q8WV35 223 aa17.35■□□□□ 0.37
CNTNAP3B-212ENST00000617422 MEGF10Q96KG7 1140 aa17.35■□□□□ 0.37
CNTNAP3B-212ENST00000617422 SIGLEC5O15389 551 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 GLAP06280 429 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 LYL1P12980 280 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 CHRNB4P30926 498 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 ADIPOQQ15848 244 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 ZNF880Q6PDB4 577 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 RNF126Q9BV68 326 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 METRNQ9UJH8 293 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 CFAP46Q8IYW2 2715 aa17.34■□□□□ 0.37
CNTNAP3B-212ENST00000617422 SFTPCP11686 197 aa17.33■□□□□ 0.37
CNTNAP3B-212ENST00000617422 SRSF7Q16629 238 aaKnown RBP eCLIP17.33■□□□□ 0.37
CNTNAP3B-212ENST00000617422 ITLN1Q8WWA0 313 aa17.33■□□□□ 0.37
CNTNAP3B-212ENST00000617422 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SH2D1BO14796 132 aa17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 RBM39Q14498 530 aaKnown RBP17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 MOGAT3Q86VF5 341 aa17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 DMRTC2Q8IXT2 367 aaPredicted RBP17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ATP23Q9Y6H3 246 aa17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 HIVEP3Q5T1R4 2406 aa17.33■□□□□ 0.36
CNTNAP3B-212ENST00000617422 H7C2Y5 167 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 KNG1P01042 644 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 IGHV1-46P01743 117 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 AADACP22760 399 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ARHGDIBP52566 201 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 FXYD4P59646 89 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SURF2Q15527 256 aaPredicted RBP17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 FBXL19-AS1Q494R0 122 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 C10orf91Q5T1B1 145 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PRSS54Q6PEW0 395 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CLEC18BQ6UXF7 455 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ZNF497Q6ZNH5 498 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 LINC01560Q8TB33 94 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TOMM40LQ969M1 308 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CYTL1Q9NRR1 136 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CARHSP1Q9Y2V2 147 aaKnown RBP17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 KIAA2026Q5HYC2 2103 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PKDREJQ9NTG1 2253 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 IGSF10Q6WRI0 2623 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TRDCB7Z8K6 153 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SLC9A3R2Q15599 337 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 IL34Q6ZMJ4 242 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PUSL1Q8N0Z8 303 aaKnown RBP17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 GAPTQ8N292 157 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 GCSAMQ8N6F7 178 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 NEUROG1Q92886 237 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 MMP26Q9NRE1 261 aa17.32■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TMEM8BA6NDV4 472 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SHISA9B4DS77 424 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 OR4A8P0C604 315 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PET100P0DJ07 73 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 LMO1P25800 156 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SPAG16Q8N0X2 631 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 BOLLQ8N9W6 283 aaKnown RBP17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CNTNAP3BQ96NU0 1288 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 AQP10Q96PS8 301 aa17.31■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SRRM5B3KS81 715 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ANKRD55Q3KP44 614 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SHEQ5VZ18 495 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TGIF2LYQ8IUE0 185 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ZCCHC24Q8N2G6 241 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CD177Q8N6Q3 437 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 MOB3AQ96BX8 217 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 RIMS4Q9H426 269 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 DNAJB11Q9UBS4 358 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 LRBAP50851 2863 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ANKHD1Q8IWZ3 2542 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 GPR31O00270 319 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 MZT1Q08AG7 82 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 NCMAPQ5T1S8 102 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 RNASE6Q93091 150 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 RRNAD1Q96FB5 475 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PLPPR2Q96GM1 343 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TREM2Q9NZC2 230 aa17.3■□□□□ 0.36
CNTNAP3B-212ENST00000617422 F8W036 122 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 H0YIZ8 118 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CTSDP07339 412 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 CFHR2P36980 270 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 BLOC1S1P78537 153 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 FAM201AQ5SY85 155 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SSX8Q7RTT4 187 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 KLF2Q9Y5W3 355 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SIAH2O43255 324 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 KCNAB3O43448 404 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 PPYP01298 95 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ZNF728P0DKX0 622 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 ADCYAP1P18509 176 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SELENOVP59797 346 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SMIM21Q3B7S5 101 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 LDLRAD3Q86YD5 345 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 LINC00518Q8N0U6 118 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 UBALD1Q8TB05 177 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 TMED6Q8WW62 240 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 SAT2Q96F10 170 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 C2orf50Q96LR7 162 aa17.29■□□□□ 0.36
CNTNAP3B-212ENST00000617422 GCM1Q9NP62 436 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms