RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZP4Q12836 540 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 ACOT6Q3I5F7 207 aaPredicted RBP5.75□□□□□ -1.49
LMO3-235ENST00000616247 SPINK9Q5DT21 86 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 SSX7Q7RTT5 188 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 OR10V1Q8NGI7 309 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 ZNF837Q96EG3 531 aaPredicted RBP5.75□□□□□ -1.49
LMO3-235ENST00000616247 ZNF385AQ96PM9 386 aaKnown RBP5.75□□□□□ -1.49
LMO3-235ENST00000616247 UCN2Q96RP3 112 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 IMMP2LQ96T52 175 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 HSPB9Q9BQS6 159 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 LRRC61Q9BV99 259 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 CRISPLD2Q9H0B8 497 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 CISD1Q9NZ45 108 aaKnown RBP5.75□□□□□ -1.49
LMO3-235ENST00000616247 FOXJ2Q9P0K8 574 aa5.75□□□□□ -1.49
LMO3-235ENST00000616247 HRASP01112 189 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 PSG2P11465 335 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 DTYMKP23919 212 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 RND2P52198 227 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 PTTG1IPP53801 180 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 HBG1P69891 147 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 HBG2P69892 147 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 TMPRSS7Q7RTY8 843 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 MCEMP1Q8IX19 187 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CMTM2Q8TAZ6 248 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 HLA-CQ95604 372 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 OXGR1Q96P68 337 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 OR4C12Q96R67 309 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 TM2D1Q9BX74 207 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CFHR5Q9BXR6 569 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 MRPL13Q9BYD1 178 aaKnown RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 DNAJC4Q9NNZ3 241 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ERRFI1Q9UJM3 462 aaPredicted RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 NUP210LQ5VU65 1888 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 LOC102724200A0A096LPH7 203 aaPredicted RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 IGKV1-12A0A0C4DH73 117 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 SPTY2D1-AS1A0A0U1RR47 76 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 C1QTNF9BB2RNN3 333 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 DHHO43323 396 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CA11O75493 328 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 TUSC2O75896 110 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 IGKV1D-12P01611 117 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 PFN1P07737 140 aaKnown RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 LINC00271P0C7V0 271 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 B4GALT1P15291 398 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CD82P27701 267 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 THBS3P49746 956 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 EIF3IQ13347 325 aaKnown RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 SLC25A47Q6Q0C1 308 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ERASQ7Z444 233 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ZDHHC23Q8IYP9 409 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ZNF611Q8N823 705 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 OR51G1Q8NGK1 321 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 OR1L3Q8NH93 324 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 OR2V1Q8NHB1 315 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 GPR146Q96CH1 333 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CCDC74BQ96LY2 380 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ALKBH3Q96Q83 286 aaPredicted RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 CDCA3Q99618 268 aaPredicted RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 ANGPTL4Q9BY76 406 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 RIMS4Q9H426 269 aaPredicted RBP5.74□□□□□ -1.49
LMO3-235ENST00000616247 CDH20Q9HBT6 801 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 IL23AQ9NPF7 189 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 MANBALQ9NQG1 85 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 IGKV1-27A0A075B6S5 117 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 A0A0G2JRQ6 117 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CLEC18AA5D8T8 446 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CBY3A6NI87 242 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 NUPR1O60356 82 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 GCH1P30793 250 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 PPP1CBP62140 327 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ZNF726P1Q15940 193 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 CLEC18CQ8NCF0 446 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 SGMS2Q8NHU3 365 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 FAM131CQ96AQ9 280 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 ACY3Q96HD9 319 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 FGF21Q9NSA1 209 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 RNF24Q9Y225 148 aa5.74□□□□□ -1.49
LMO3-235ENST00000616247 B4E171 279 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 SYNGR2O43760 224 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 S100A7P31151 101 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 TSPAN7P41732 249 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 ARL16Q0P5N6 197 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 SHHQ15465 462 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 PHYHD1Q5SRE7 291 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 C1orf194Q5T5A4 169 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 ZNF468Q5VIY5 522 aaPredicted RBP5.73□□□□□ -1.49
LMO3-235ENST00000616247 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.73□□□□□ -1.49
LMO3-235ENST00000616247 LRTM2Q8N967 370 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 TMEM170AQ8WVE7 144 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 PNRC2Q9NPJ4 139 aaKnown RBP5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR6C3Q9NZP0 311 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 IL36RNQ9UBH0 155 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 R4GN57 208 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 C20orf202A1L168 122 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 SIRPB1O00241 398 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 KBTBD11O94819 623 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 CCL2P13500 99 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 PMCHP20382 165 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 MPLP40238 635 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms