RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 MPV17LQ2QL34 196 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 FAM209AQ5JX71 171 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 NANPQ8TBE9 248 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 NPIPB7O75200 414 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 C1QL1O75973 258 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF345Q14585 488 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 TIMD4Q96H15 378 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 OR2V2Q96R30 315 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 RTBDNQ9BSG5 229 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 ALX4Q9H161 411 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CLDN16Q9Y5I7 305 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 IGKV1-9A0A0C4DH69 117 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 NTN3O00634 580 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 OR10J4P0C629 311 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 LHX2P50458 406 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CLDN18P56856 261 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CXorf66Q5JRM2 361 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 OR5P3Q8WZ94 311 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 RND1Q92730 232 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CIB3Q96Q77 187 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 FAM103A1Q9BTL3 118 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 SAMD10Q9BYL1 202 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 SPTBP11277 2137 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 THADAQ6YHU6 1953 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PPE2 198 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 H0Y8G0 127 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF708P17019 499 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 KCNJ3P48549 501 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 LINC00596Q86U02 117 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 KLF14Q8TD94 323 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 CCL13Q99616 98 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 MYOZ1Q9NP98 299 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 LPAR3Q9UBY5 353 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 hCG_38984A0A1B0GV85 526 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM210A6NLX4 147 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PPIHO43447 177 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PGLYRP1O75594 196 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 HBZP02008 142 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 NMBP08949 121 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 NQO2P16083 231 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 TNFRSF1AP19438 455 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 MPV17P39210 176 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 GNB2P62879 340 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 DAZAP1Q96EP5 407 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 TP53RKQ96S44 253 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 WIPI2Q9Y4P8 454 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 MAP1LC3B2A6NCE7 125 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 SYNGR2O43760 224 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PRDX2P32119 198 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 CCL8P80075 99 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 NCR3LG1Q68D85 454 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PAQR4Q8N4S7 273 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 FAM24BQ8N5W8 94 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 CA5BP1Q8WTZ4 195 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 MAP1LC3BQ9GZQ8 125 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 DLL3Q9NYJ7 618 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 SPRR3Q9UBC9 169 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 LRRC3CA6NJW4 275 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 GUCA2BQ16661 112 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 HSD17B13Q7Z5P4 300 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF581Q9P0T4 197 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 LOC102723996A0A087X1L8 192 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 LY6G6EA0A0G2JKS1 128 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM218A2RU14 115 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 NCBP2LA6PVI3 153 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 FOXG1P55316 489 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 AWAT1Q58HT5 328 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 OR10G4Q8NGN3 311 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 OR10G9Q8NGN4 311 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 OR10G7Q8NGN6 311 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 OR51I2Q9H344 312 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 Q9N2K0 584 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 PIPOXQ9P0Z9 390 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 U3KQA8 63 aa7.66□□□□□ -1.18
PDLIM5-222ENST00000615540 TRAV14DV4A0A0A6YYC5 116 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 RBFOX3A6NFN3 312 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 NPIPB13A6NJU9 1138 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 NPIPB4C9JG80 1138 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 OPRK1P41145 380 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 ERHP84090 104 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM187Q14656 261 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 C5orf24Q7Z6I8 188 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 MDC1Q14676 2089 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 IGHV3-21A0A0B4J1V1 117 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 RAB19A4D1S5 217 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 COX7A2P2O60397 106 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 SMPD2O60906 423 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 MUC1P15941 1255 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 CD200P41217 278 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 H3F3AP84243 136 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 PRR27Q6MZM9 219 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 POM121L2Q96KW2 1035 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 RNF7Q9UBF6 113 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 ARPC4-TTLL3A0A0A6YYG9 625 aa7.65□□□□□ -1.18
PDLIM5-222ENST00000615540 FLI1Q01543 452 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms