RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 OR2H2O95918 312 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 LALBAP00709 142 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 TTRP02766 147 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 G0S2P27469 103 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 AESQ08117 197 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 MIDNQ504T8 468 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 SH3BGRL3Q9H299 93 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 CHST1O43916 411 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 MMP9P14780 707 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 PPP1CCP36873 323 aaKnown RBP8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 CA7P43166 264 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 ADIRFQ15847 76 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 OR5P3Q8WZ94 311 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 CYB5R3P00387 301 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 PRSS33Q8NF86 280 aa8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 PLEKHB1Q9UF11 243 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF9-204ENST00000615230 USF1P22415 310 aaPredicted RBP8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 FFAR4Q5NUL3 377 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 OTPQ5XKR4 325 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 VWA1Q6PCB0 445 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 HOGA1Q86XE5 327 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 ABHD12Q8N2K0 398 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 CELF2-AS1Q8N7Q2 184 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 MANBALQ9NQG1 85 aa8.4□□□□□ -1.07
TNFRSF9-204ENST00000615230 SERTM2A0A1B0GWG4 89 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 IQCF6A8MYZ5 107 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 GNLYP22749 145 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 CRYBB2P43320 205 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 OPN4Q9UHM6 478 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 HSF4Q9ULV5 492 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 HIGD1AQ9Y241 93 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 BCL2L11O43521 198 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 PPYP01298 95 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 LINC00271P0C7V0 271 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 TSPOP30536 169 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 P2RX3P56373 397 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR1B1Q8NGR6 318 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 ST6GALNAC2Q9UJ37 374 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZIC3O60481 467 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 ONECUT2O95948 504 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 EFNA4P52798 201 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 WDR13Q9H1Z4 485 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 ANKRD20A5PA0PJZ0 165 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 IL11P20809 199 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 BAMBIQ13145 260 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM166AQ6J272 317 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 C9orf106Q8NAJ2 232 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR52M1Q8NGK5 317 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 DTD1Q8TEA8 209 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 PUS1Q9Y606 427 aaKnown RBP eCLIP8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 ODAMA1E959 279 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 C17orf100A8MU93 164 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 CCSO14618 274 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 MFAP4P55083 255 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 FAM27E3Q08E93 113 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 SYT8Q8NBV8 401 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 STARD4Q96DR4 205 aa8.39□□□□□ -1.07
TNFRSF9-204ENST00000615230 HBZP02008 142 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGHV1-2P23083 117 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 Q6ZS92 163 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 ABHD14BQ96IU4 210 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 C4orf51C9J302 202 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 S1PR2O95136 353 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 OXA1LQ15070 435 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 FDX2Q6P4F2 183 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 G6PC2Q9NQR9 355 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SCN5AQ14524 2016 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 C9orf170A2RU37 121 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 CDS2O95674 445 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 C1QBP02746 253 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 CECR9P0C854 216 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SMIM18P0DKX4 95 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SLC25A4P12235 298 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 PSG9Q00887 426 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 GAMTQ14353 236 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZIC4Q8N9L1 334 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SNRNP40Q96DI7 357 aaKnown RBP8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 PLSCR4Q9NRQ2 329 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF230Q9UIE0 474 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 U3KQ87 197 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SEMG1P04279 462 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 VDAC2P45880 294 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 SELENOTP62341 195 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 FLVCR1-AS1Q8TAF5 88 aa8.38□□□□□ -1.07
TNFRSF9-204ENST00000615230 NPIPB11E5RHQ5 1161 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms