RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TCTEX1D4Q5JR98 221 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF329Q86UD4 541 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 ODF3L1Q8IXM7 274 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 OR13D1Q8NGV5 346 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 ABHD14BQ96IU4 210 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 VCX3BQ9H321 246 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 IDI2-AS1Q9NZ38 188 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 DAPK2Q9UIK4 370 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 RNF150Q9ULK6 438 aa4.55□□□□□ -1.68
CPNE3-208ENST00000614678 A6NDX4 124 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 LDLRAD4O15165 306 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ST8SIA5O15466 376 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 SNRNP70P08621 437 aaKnown RBP4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CD28P10747 220 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CD37P11049 281 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CPT2P23786 658 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 HTR1DP28221 377 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 IGSF11Q5DX21 431 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 NHLRC3Q5JS37 347 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF773Q6PK81 442 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF367Q7RTV3 350 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF565Q8N9K5 539 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CHST4Q8NCG5 386 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CFHR4Q92496 578 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 GLS2Q9UI32 602 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CCRL2O00421 344 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 SLC17A2O00624 439 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 PEX14O75381 377 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CRYBA1P05813 215 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 FUT3P21217 361 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 TPTE2P1Q5T6R2 138 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 C5orf30Q96GV9 206 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 JMJD8Q96S16 334 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 MMP28Q9H239 520 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 V9GY05 133 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 TMEM30CPA0ZSE6 113 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 MEIS3P1A6NDR6 274 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 IFITM5A6NNB3 132 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 MCRIP1C9JLW8 97 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 PDCD6O75340 191 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 IGKV1D-33P01593 117 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 IGKV1-33P01594 117 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 SMIM18P0DKX4 95 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CD36P16671 472 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 NCS1P62166 190 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 GLT8D1Q68CQ7 371 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF439Q8NDP4 499 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 UQCC2Q9BRT2 126 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 DPM3Q9P2X0 92 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 LRRC42Q9Y546 428 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CLPSL1A2RUU4 121 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 A6NHS1 94 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF729A6NN14 1252 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-208ENST00000614678 RAB27BO00194 218 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 MAPK3P27361 379 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-208ENST00000614678 FOXL1Q12952 345 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 SVOPQ8N4V2 548 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 KLHDC1Q8N7A1 406 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 FAM110DQ8TAY7 271 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-208ENST00000614678 ZFAND2BQ8WV99 257 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 MALSU1Q96EH3 234 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 DUX3Q96PT4 197 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 CITED1Q99966 193 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 PECRQ9BY49 303 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 DPAGT1Q9H3H5 408 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 GAL3ST2Q9H3Q3 398 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 IFT22Q9H7X7 185 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 OR2S2Q9NQN1 319 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 BLOC1S6Q9UL45 172 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 POMT1Q9Y6A1 747 aa4.54□□□□□ -1.68
CPNE3-208ENST00000614678 TRDV1A0A1B0GX56 115 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 FAM90A22PA8MWA6 464 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GABARAPL2P60520 117 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 RAB11BQ15907 218 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 MPV17LQ2QL34 196 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 C9orf152Q5JTZ5 239 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 NKAIN3Q8N8D7 197 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 LGALS14Q8TCE9 139 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 HAVCR2Q8TDQ0 301 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 NUDCD2Q8WVJ2 157 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 CAPSLQ8WWF8 208 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 ST6GALNAC6Q969X2 333 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 ZNF747Q9BV97 191 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 PLEKHJ1Q9NW61 149 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GFOD1Q9NXC2 390 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TAS2R3Q9NYW6 316 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 OR6C3Q9NZP0 311 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 TET2Q6N021 2002 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 A0A087X0M5 115 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 A0A1B0GX30 115 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 POM121CA8CG34 1229 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 F2RL2O00254 374 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 NAPSAO96009 420 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 RAB3BP20337 219 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 RPS19P39019 145 aaKnown RBP4.53□□□□□ -1.68
CPNE3-208ENST00000614678 VBP1P61758 197 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 HES1Q14469 280 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 MORN2Q502X0 79 aa4.53□□□□□ -1.68
CPNE3-208ENST00000614678 GAPTQ8N292 157 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms