RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SELENOIQ9C0D9 397 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 IGHV1-3A0A0C4DH29 117 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 CRTAPO75718 401 aaPredicted RBP18.04■□□□□ 0.48
FAM228B-208ENST00000613899 PF4P02776 101 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 CD33P20138 364 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 SYT6Q5T7P8 510 aaPredicted RBP18.04■□□□□ 0.48
FAM228B-208ENST00000613899 RNLSQ5VYX0 342 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 UBALD1Q8TB05 177 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 Q96M66 194 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 BANF2Q9H503 90 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 GHRLQ9UBU3 117 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 PEX16Q9Y5Y5 336 aa18.04■□□□□ 0.48
FAM228B-208ENST00000613899 IGHV3-43A0A0B4J1X8 118 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 PSMB11A5LHX3 300 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 C12orf77C9JDV5 145 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 GLAP06280 429 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 CDK1P06493 297 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 IGHV3-43DP0DP04 118 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 REG1BP48304 166 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 GPR50Q13585 617 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 HNF4GQ14541 408 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 MOB3BQ86TA1 216 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 GAPTQ8N292 157 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 MS4A15Q8N5U1 240 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 TMEM104Q8NE00 496 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 CST11Q9H112 138 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 DCLRE1BQ9H816 532 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 GNG12Q9UBI6 72 aa18.03■□□□□ 0.48
FAM228B-208ENST00000613899 TXNL1O43396 289 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 SC5DO75845 299 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 FUT3P21217 361 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 GABPB1Q06547 395 aaPredicted RBP18.02■□□□□ 0.48
FAM228B-208ENST00000613899 EBI3Q14213 229 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 C10orf99Q6UWK7 81 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 WFDC9Q8NEX5 89 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 OR4K15Q8NH41 348 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 CHPT1Q8WUD6 406 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 PHF21AQ96BD5 680 aa18.02■□□□□ 0.48
FAM228B-208ENST00000613899 UBBP0CG47 229 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 ACSM3Q53FZ2 586 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 SLC25A48Q6ZT89 311 aaKnown RBP18.01■□□□□ 0.47
FAM228B-208ENST00000613899 PRR18Q8N4B5 295 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 RTN4IP1Q8WWV3 396 aaPredicted RBP18.01■□□□□ 0.47
FAM228B-208ENST00000613899 SGCDQ92629 289 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 NECAP2Q9NVZ3 263 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 SCN3BQ9NY72 215 aa18.01■□□□□ 0.47
FAM228B-208ENST00000613899 IGHV3-72A0A0B4J1Y9 119 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 SERPINE3A8MV23 424 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 PDCD6O75340 191 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 HBZP02008 142 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 PRB2P02812 416 aaPredicted RBP18■□□□□ 0.47
FAM228B-208ENST00000613899 SLC35A2P78381 396 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 C6orf141Q5SZD1 244 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 SLC35E3Q7Z769 313 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 ZNF554Q86TJ5 538 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 TGIF2LXQ8IUE1 241 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 FOXRED2Q8IWF2 684 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 OR2T10Q8NGZ9 312 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 PHYHIPQ92561 330 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 ST6GALNAC6Q969X2 333 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 FAM46BQ96A09 425 aa18■□□□□ 0.47
FAM228B-208ENST00000613899 EAF1Q96JC9 268 aaPredicted RBP18■□□□□ 0.47
FAM228B-208ENST00000613899 ANKRD65E5RJM6 399 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 PTGES3LE9PB15 166 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 IGHG2P01859 326 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 CD1BP29016 333 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 ZNF137PP52743 207 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 SPHARQ15513 63 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 RBM48Q5RL73 367 aaKnown RBP17.99■□□□□ 0.47
FAM228B-208ENST00000613899 GLT8D1Q68CQ7 371 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 SIGIRRQ6IA17 410 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 FAM53AQ6NSI3 398 aaPredicted RBP17.99■□□□□ 0.47
FAM228B-208ENST00000613899 UNQ9370/PRO34162Q6UXP9 181 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 Q8N6K4 173 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 ZNF439Q8NDP4 499 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 TMED9Q9BVK6 235 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 MBNL3Q9NUK0 354 aaKnown RBP17.99■□□□□ 0.47
FAM228B-208ENST00000613899 KCNIP1Q9NZI2 227 aa17.99■□□□□ 0.47
FAM228B-208ENST00000613899 UBE2QL1A1L167 161 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 H0YHG0 523 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 SLC31A2O15432 143 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 RCC1P18754 421 aaPredicted RBP17.98■□□□□ 0.47
FAM228B-208ENST00000613899 VHLP40337 213 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 SLC35B1P78383 322 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 INSL4Q14641 139 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 ZNF329Q86UD4 541 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 OR10V1Q8NGI7 309 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 OR1L1Q8NH94 360 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 NOL4LQ96MY1 436 aaPredicted RBP17.98■□□□□ 0.47
FAM228B-208ENST00000613899 TAF9BQ9HBM6 251 aa17.98■□□□□ 0.47
FAM228B-208ENST00000613899 LIN7CQ9NUP9 197 aaKnown RBP17.98■□□□□ 0.47
FAM228B-208ENST00000613899 LSM2Q9Y333 95 aaKnown RBP17.98■□□□□ 0.47
FAM228B-208ENST00000613899 NCBP2LA6PVI3 153 aaKnown RBP17.97■□□□□ 0.47
FAM228B-208ENST00000613899 MPIG6BO95866 241 aa17.97■□□□□ 0.47
FAM228B-208ENST00000613899 MOSP00540 346 aa17.97■□□□□ 0.47
FAM228B-208ENST00000613899 IGLL1P15814 213 aa17.97■□□□□ 0.47
FAM228B-208ENST00000613899 MED22Q15528 200 aa17.97■□□□□ 0.47
FAM228B-208ENST00000613899 NKAPLQ5M9Q1 402 aa17.97■□□□□ 0.47
FAM228B-208ENST00000613899 FAM27D1Q5T7N8 215 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms