RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TRBV6-6A0A0A6YYG2 114 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 TRIM77I1YAP6 450 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 F2RL2O00254 374 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 TOR1AO14656 332 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 SPINT2O43291 252 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 IGLV1-47P01700 117 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 IGHV3-7P01780 117 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 HBZP02008 142 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 GNB3P16520 340 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 IER3P46695 156 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 PRRX1P54821 245 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 LOXL3P58215 753 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 Q6ZPA2 131 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 CLVS1Q8IUQ0 354 aaPredicted RBP13.47□□□□□ -0.25
IRF1-211ENST00000613424 PRR18Q8N4B5 295 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 BEND2Q8NDZ0 799 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 OR52M1Q8NGK5 317 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 OR4P4Q8NGL7 312 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 OR1L1Q8NH94 360 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 LEAP2Q969E1 77 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 MALSU1Q96EH3 234 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 CMSS1Q9BQ75 279 aaKnown RBP13.47□□□□□ -0.25
IRF1-211ENST00000613424 ZMAT3Q9HA38 289 aaKnown RBP13.47□□□□□ -0.25
IRF1-211ENST00000613424 RHBDL2Q9NX52 303 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 SPATA2Q9UM82 520 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 PSG11Q9UQ72 335 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 ATRQ13535 2644 aa13.47□□□□□ -0.25
IRF1-211ENST00000613424 A0A075B6Q4 140 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 IGHV3-43A0A0B4J1X8 118 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 CLDN34H7C241 214 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 J3QR06 171 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 SDCBPO00560 298 aaPredicted RBP13.46□□□□□ -0.25
IRF1-211ENST00000613424 MFNGO00587 321 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 IGHV3-43DP0DP04 118 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.25
IRF1-211ENST00000613424 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 CDNFQ49AH0 187 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 MINOS1Q5TGZ0 78 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 FAM53AQ6NSI3 398 aaPredicted RBP13.46□□□□□ -0.25
IRF1-211ENST00000613424 ZNF554Q86TJ5 538 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 OR9G1Q8NH87 305 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 SETD6Q8TBK2 473 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 SLC25A38Q96DW6 304 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 RAB9BQ9NP90 201 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 MINOS1-NBL1R4GNA1 71 aa13.46□□□□□ -0.25
IRF1-211ENST00000613424 IGHV4-59P01825 116 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 CD3GP09693 182 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 HTR1DP28221 377 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 SSX2Q16385 188 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 HLA-DRB5Q30154 266 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 TMEM86BQ8N661 226 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 NDNFQ8TB73 568 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 ZFAND2BQ8WV99 257 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 TMEM158Q8WZ71 300 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 DCSTAMPQ9H295 470 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 DPAGT1Q9H3H5 408 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 Q9N2K0 584 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 C12orf4Q9NQ89 552 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 DPM3Q9P2X0 92 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
IRF1-211ENST00000613424 POMT1Q9Y6A1 747 aa13.45□□□□□ -0.26
IRF1-211ENST00000613424 POM121CA8CG34 1229 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 BUB1B-PAK6H3BSN5 160 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 SCGNO76038 276 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
IRF1-211ENST00000613424 GNG10P50151 68 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 RORCP51449 518 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 TMBIM6P55061 237 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 MRPS15P82914 257 aaKnown RBP13.44□□□□□ -0.26
IRF1-211ENST00000613424 HMGN3Q15651 99 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 FAM216AQ8WUB2 273 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 GALMQ96C23 342 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 KCTD12Q96CX2 325 aaKnown RBP13.44□□□□□ -0.26
IRF1-211ENST00000613424 MDFIQ99750 246 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 SSX3Q99909 188 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 MMP28Q9H239 520 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 HILPDAQ9Y5L2 63 aa13.44□□□□□ -0.26
IRF1-211ENST00000613424 A0A1W2PPE3 182 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 LEUTXA8MZ59 168 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 HTD2P86397 168 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 ARL6IP1Q15041 203 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 TMEM30BQ3MIR4 351 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 ZNF260Q3ZCT1 412 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 PLA1AQ53H76 456 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 OR52L2PQ8NGH6 319 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 OR10V1Q8NGI7 309 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 RAB2BQ8WUD1 216 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 CREB3L1Q96BA8 519 aa13.43□□□□□ -0.26
IRF1-211ENST00000613424 PHF21AQ96BD5 680 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms