RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 NMSQ5H8A3 153 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 TPRX1Q8N7U7 411 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMEM178AQ8NBL3 297 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR5C1Q8NGR4 320 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 SEC11CQ9BY50 192 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZMAT5Q9UDW3 170 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 CNOT4O95628 575 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 DANCRP0C864 163 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 DYNLT3P51808 116 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 Q6ZS49 121 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZFP82Q8N141 532 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMEM252Q8N6L7 170 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 GINS3Q9BRX5 216 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 PIEZO2Q9H5I5 2752 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 J3QT63 122 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 NXPH2O95156 264 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 HNF4GQ14541 408 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 NANOS1Q8WY41 292 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 RARRES2Q99969 163 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 EIF5A2Q9GZV4 153 aaKnown RBP11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 TRAPPC2LQ9UL33 140 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
PCDHGA3-202ENST00000612467 BORCS7-ASMTA0A0B4J1R7 106 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 WRBO00258 174 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 HSPA12AO43301 675 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 PSPNO60542 156 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 WDR1O75083 606 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 UCP1P25874 307 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 LINC00205P59089 165 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMEM267Q0VDI3 215 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 TESK1Q15569 626 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 HFEQ30201 348 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 H1FOOQ8IZA3 346 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 C2CD4CQ8TF44 421 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 GPR146Q96CH1 333 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 SCRT1Q9BWW7 348 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 OBP2BQ9NPH6 170 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 LUZP4Q9P127 313 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 BSNQ9UPA5 3926 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF98A6NK75 572 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 ATXN7O15265 892 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 MLNRO43193 412 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 PVALBP20472 110 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 F2RP25116 425 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 SNCAP37840 140 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 GABRA6Q16445 453 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 GPR157Q5UAW9 335 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF295-AS1Q8N0V1 137 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 GMPPAQ96IJ6 420 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 BCL2L14Q9BZR8 327 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 CLCF1Q9UBD9 225 aa11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
PCDHGA3-202ENST00000612467 IAPPP10997 89 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 FABP6P51161 128 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 AKR1D1P51857 326 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 PAX9P55771 341 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 UCP2P55851 309 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 VAMP2P63027 116 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 GUK1Q16774 197 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 KLF14Q8TD94 323 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 RTL8AQ9BWD3 113 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 ROS1P08922 2347 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 SNAPINO95295 136 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 KIR2DL2P43627 348 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 Q6ZR03 302 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR2G3Q8NGZ4 309 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 PLPPR2Q96GM1 343 aa11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
PCDHGA3-202ENST00000612467 SEC11BP0C7V7 166 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR13C7P0DN81 318 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 VDAC1P21796 283 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 RND3P61587 244 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 GTF3AQ92664 365 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms