RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 GPR87Q9BY21 358 aa12.1□□□□□ -0.47
HOXA3-207ENST00000612286 C8orf33Q9H7E9 229 aaPredicted RBP12.1□□□□□ -0.47
HOXA3-207ENST00000612286 V9GYS6 101 aa12.1□□□□□ -0.47
HOXA3-207ENST00000612286 LAMA5O15230 3695 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 BCAT2O15382 392 aaPredicted RBP12.09□□□□□ -0.47
HOXA3-207ENST00000612286 WNT5AP41221 380 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 GLIPR1P48060 266 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 PRR31Q5SQ13 230 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 GPR146Q96CH1 333 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 OPA3Q9H6K4 179 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 LYRM2Q9NU23 88 aaPredicted RBP12.09□□□□□ -0.47
HOXA3-207ENST00000612286 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 CLDN34H7C241 214 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 LILRA1O75019 489 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
HOXA3-207ENST00000612286 H3F3AP84243 136 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 FOXB1Q99853 325 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 PSENENQ9NZ42 101 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 DMXL2Q8TDJ6 3036 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 A0A1W2PQM1 296 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 NXPH1P58417 271 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 CCDC74BQ96LY2 380 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 Q9N2K0 584 aa12.09□□□□□ -0.47
HOXA3-207ENST00000612286 CHCHD2Q9Y6H1 151 aaPredicted RBP12.09□□□□□ -0.47
HOXA3-207ENST00000612286 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 CCL1P22362 96 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
HOXA3-207ENST00000612286 CEBPDP49716 269 aaPredicted RBP12.08□□□□□ -0.48
HOXA3-207ENST00000612286 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
HOXA3-207ENST00000612286 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 SSC4DQ8WTU2 575 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 C12orf49Q9H741 205 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 PKDREJQ9NTG1 2253 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 PCNX1Q96RV3 2341 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 A0A0U1RQV5 110 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 EREGO14944 169 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 NCR3LG1Q68D85 454 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 OR51G1Q8NGK1 321 aa12.08□□□□□ -0.48
HOXA3-207ENST00000612286 PITX3O75364 302 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 TPRX1Q8N7U7 411 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 CPEB3Q8NE35 698 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 PSMF1Q92530 271 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 MALSU1Q96EH3 234 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 A6NNC1 897 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 H7BYZ3 331 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 OR4A8P0C604 315 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 SUCLG1P53597 346 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ZNF705AQ6ZN79 300 aaPredicted RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 NUDT16L1Q9BRJ7 211 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 PRRG4Q9BZD6 226 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ZNF552Q9H707 407 aaPredicted RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 IGKV1-6A0A0C4DH72 117 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 TCAPO15273 167 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ZNF737O75373 536 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 GDF1P27539 372 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 PRDX4Q13162 271 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 EIF3IQ13347 325 aaKnown RBP12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 SPSB1Q96BD6 273 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 ATP5SQ99766 215 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 CLN8Q9UBY8 286 aa12.07□□□□□ -0.48
HOXA3-207ENST00000612286 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 PPP5D1E7EU14 171 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 RHBDL1O75783 438 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 ECI1P42126 302 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 LHFPL2Q6ZUX7 228 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 WDR5BQ86VZ2 330 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 ARV1Q9H2C2 271 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 TAAR3PQ9P1P4 343 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 FAM166BA8MTA8 275 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 ZIC3O60481 467 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 BCL2P10415 239 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 GNB2P62879 340 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 OR5B12Q96R08 314 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
HOXA3-207ENST00000612286 C1QTNF9BB2RNN3 333 aa12.05□□□□□ -0.48
HOXA3-207ENST00000612286 PGLYRP1O75594 196 aaPredicted RBP12.05□□□□□ -0.48
HOXA3-207ENST00000612286 AMBPP02760 352 aa12.05□□□□□ -0.48
HOXA3-207ENST00000612286 VDAC1P21796 283 aa12.05□□□□□ -0.48
HOXA3-207ENST00000612286 SUMO3P55854 103 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms