RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 IGKV1D-12P01611 117 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 IGHV2-5P01817 119 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 SLC25A4P12235 298 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 IL2RGP31785 369 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ATP1B3P54709 279 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 KRTAP1-1Q07627 177 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 PDZK1IP1Q13113 114 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 RSU1Q15404 277 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 TMEM128Q5BJH2 165 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 AADACL3Q5VUY0 350 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 LIN54Q6MZP7 749 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 WDR82Q6UXN9 313 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF826PQ6ZT77 177 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 TMUB2Q71RG4 321 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 C6orf201Q7Z4U5 140 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 TMEM17Q86X19 198 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF573Q86YE8 665 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ZSCAN4Q8NAM6 433 aaPredicted RBP7.37□□□□□ -1.23
SMAD4-217ENST00000611848 SCCPDHQ8NBX0 429 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 Q8NFD4 153 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 EMG1Q92979 244 aaKnown RBP7.37□□□□□ -1.23
SMAD4-217ENST00000611848 TMEM230Q96A57 120 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 MSI2Q96DH6 328 aaKnown RBP7.37□□□□□ -1.23
SMAD4-217ENST00000611848 PHB2Q99623 299 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ST6GALNAC5Q9BVH7 336 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 FGF23Q9GZV9 251 aaPredicted RBP7.37□□□□□ -1.23
SMAD4-217ENST00000611848 OR51I2Q9H344 312 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 C5orf66Q9H5L9 145 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 PATZ1Q9HBE1 687 aaKnown RBP7.37□□□□□ -1.23
SMAD4-217ENST00000611848 PLEKHJ1Q9NW61 149 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 SHPKQ9UHJ6 478 aa7.37□□□□□ -1.23
SMAD4-217ENST00000611848 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 FXYD6-FXYD2A0A087WZ82 144 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 TRAV38-1A0A0B4J264 116 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 OR5H14A6NHG9 310 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 LEUTXA8MZ59 168 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 SRRM5B3KS81 715 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 LGALS8O00214 317 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 ARPC5O15511 151 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 NDUFA2O43678 99 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF205O95201 554 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 CSTBP04080 98 aaKnown RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 DTYMKP23919 212 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 GABRR1P24046 479 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 CHATP28329 748 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 OR3A3P47888 321 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 NPY4RP50391 375 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 SURF2Q15527 256 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 ESCO2Q56NI9 601 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 NHLRC3Q5JS37 347 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 FAM201AQ5SY85 155 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 OR8H3Q8N146 312 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 LRRC29Q8WV35 223 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 RTBDNQ9BSG5 229 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 FXYD6Q9H0Q3 95 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 PPA2Q9H2U2 334 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 PCDHB16Q9NRJ7 776 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 MIOXQ9UGB7 285 aa7.36□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF230Q9UIE0 474 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 FN1P02751 2386 aaKnown RBP7.36□□□□□ -1.23
SMAD4-217ENST00000611848 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 IGKV1D-8A0A087WSZ0 117 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 PQLC2LA1A4F0 135 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 OOEPA6NGQ2 149 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 FAM157AC9JC47 383 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 F5H0A9 414 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 B3GALNT1O75752 331 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 SFT2D2O95562 160 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 TGFAP01135 160 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 MUC1P15941 1255 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 AKR1C4P17516 323 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 RBMXP38159 391 aaKnown RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 ECI1P42126 302 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 HAAOP46952 286 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 TAF9Q16594 264 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 CHRFAM7AQ494W8 412 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 TEX36Q5VZQ5 186 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 HAGHLQ6PII5 290 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 OSR2Q8N2R0 312 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 BOLLQ8N9W6 283 aaKnown RBP7.35□□□□□ -1.23
SMAD4-217ENST00000611848 YAE1D1Q9NRH1 226 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 EHFQ9NZC4 300 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 KCNS2Q9ULS6 477 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 NAV3Q8IVL0 2385 aa7.35□□□□□ -1.23
SMAD4-217ENST00000611848 A0A0D9SG52 128 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 J3QT63 122 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 FOXH1O75593 365 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 RPLP1P05386 114 aaKnown RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 WNT2P09544 360 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 RPS2P15880 293 aaKnown RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 EGR1P18146 543 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 CD80P33681 288 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 DVL1P1P54792 670 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 SUPT4H1P63272 117 aaKnown RBP7.34□□□□□ -1.23
SMAD4-217ENST00000611848 ZNF345Q14585 488 aa7.34□□□□□ -1.23
SMAD4-217ENST00000611848 NKAPLQ5M9Q1 402 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms