RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 BPIFB3P59826 476 aa7□□□□□ -1.29
SNCA-212ENST00000611107 BLMHQ13867 455 aa7□□□□□ -1.29
SNCA-212ENST00000611107 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
SNCA-212ENST00000611107 PLA1AQ53H76 456 aa7□□□□□ -1.29
SNCA-212ENST00000611107 NCR3LG1Q68D85 454 aa7□□□□□ -1.29
SNCA-212ENST00000611107 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
SNCA-212ENST00000611107 Q6ZS46 218 aa7□□□□□ -1.29
SNCA-212ENST00000611107 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
SNCA-212ENST00000611107 OR10R2Q8NGX6 335 aa7□□□□□ -1.29
SNCA-212ENST00000611107 OR4K15Q8NH41 348 aa7□□□□□ -1.29
SNCA-212ENST00000611107 LINC01006Q8NI28 216 aa7□□□□□ -1.29
SNCA-212ENST00000611107 UBALD1Q8TB05 177 aa7□□□□□ -1.29
SNCA-212ENST00000611107 CCDC107Q8WV48 283 aa7□□□□□ -1.29
SNCA-212ENST00000611107 SSMEM1Q8WWF3 244 aa7□□□□□ -1.29
SNCA-212ENST00000611107 ISOC1Q96CN7 298 aa7□□□□□ -1.29
SNCA-212ENST00000611107 RBMXL1Q96E39 390 aaKnown RBP7□□□□□ -1.29
SNCA-212ENST00000611107 KIRREL1Q96J84 757 aa7□□□□□ -1.29
SNCA-212ENST00000611107 NEDD4LQ96PU5 975 aa7□□□□□ -1.29
SNCA-212ENST00000611107 BCL7BQ9BQE9 202 aa7□□□□□ -1.29
SNCA-212ENST00000611107 FAAP24Q9BTP7 215 aa7□□□□□ -1.29
SNCA-212ENST00000611107 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
SNCA-212ENST00000611107 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
SNCA-212ENST00000611107 HSF4Q9ULV5 492 aa7□□□□□ -1.29
SNCA-212ENST00000611107 SPATA2Q9UM82 520 aa7□□□□□ -1.29
SNCA-212ENST00000611107 CEPT1Q9Y6K0 416 aa7□□□□□ -1.29
SNCA-212ENST00000611107 SESN1Q9Y6P5 492 aa7□□□□□ -1.29
SNCA-212ENST00000611107 VWFP04275 2813 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 IGHV2-26A0A0B4J1V2 119 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 KBTBD11-OT1A0A1B0GTJ5 212 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 C12orf77C9JDV5 145 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 NPIPB11E5RHQ5 1161 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 H3BUI4 141 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 H3BUX3 64 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 TMEM127O75204 238 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 CA11O75493 328 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 NDUFA7O95182 113 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 GNB3P16520 340 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 RCC1P18754 421 aaPredicted RBP6.99□□□□□ -1.29
SNCA-212ENST00000611107 CD34P28906 385 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 PROK1P58294 105 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 FOXL1Q12952 345 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 UBE2NLQ5JXB2 153 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ZNF626Q68DY1 528 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ZNF880Q6PDB4 577 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 CROCCP3Q8IVE0 287 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 BEND2Q8NDZ0 799 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 KCTD12Q96CX2 325 aaKnown RBP6.99□□□□□ -1.29
SNCA-212ENST00000611107 RAB3CQ96E17 227 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 SSX3Q99909 188 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 MEGF9Q9H1U4 602 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ATG5Q9H1Y0 275 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 TMEM133Q9H2Q1 129 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ZMAT3Q9HA38 289 aaKnown RBP6.99□□□□□ -1.29
SNCA-212ENST00000611107 ZNF286AQ9HBT8 521 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 C12orf4Q9NQ89 552 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 PLEKHJ1Q9NW61 149 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ABRACLQ9P1F3 81 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 ELF5Q9UKW6 265 aaPredicted RBP6.99□□□□□ -1.29
SNCA-212ENST00000611107 MMP24Q9Y5R2 645 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 POMT1Q9Y6A1 747 aa6.99□□□□□ -1.29
SNCA-212ENST00000611107 A0A075B6Q4 140 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 A0A087X0M5 115 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 TRBV6-6A0A0A6YYG2 114 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 A0A1B0GX30 115 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 hCG_1809904A0A1W2PP81 198 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 A0A1W2PPE2 198 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 A0A1W2PR64 198 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 A0A1W2PRV1 198 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 METTL21EPA6NDL7 271 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 TMEM235A6NFC5 223 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 ORC5O43913 435 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 EIF4EP06730 217 aaKnown RBP6.98□□□□□ -1.29
SNCA-212ENST00000611107 FBP1P09467 338 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 LOXL3P58215 753 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 HABP2Q14520 560 aaPredicted RBP6.98□□□□□ -1.29
SNCA-212ENST00000611107 HMGN3Q15651 99 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 FAM189A2Q15884 450 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 LTC4SQ16873 150 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 C6orf183Q5T699 404 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 Q6ZTK2 550 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 SAMD12Q8N8I0 201 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 OR11H6Q8NGC7 330 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 OR4P4Q8NGL7 312 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 OR1L1Q8NH94 360 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 RFESDQ8TAC1 157 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 DYNC2LI1Q8TCX1 351 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 CLEC7AQ9BXN2 247 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNCA-212ENST00000611107 IDI2-AS1Q9NZ38 188 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 CCDC59Q9P031 241 aaKnown RBP6.98□□□□□ -1.29
SNCA-212ENST00000611107 VPREB3Q9UKI3 123 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 TRAPPC2LQ9UL33 140 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
SNCA-212ENST00000611107 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
SNCA-212ENST00000611107 TNCP24821 2201 aa6.97□□□□□ -1.29
SNCA-212ENST00000611107 IGHV3-43A0A0B4J1X8 118 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms