RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 FAM90A23PA8MXZ1 464 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 TMEM30BQ3MIR4 351 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 C6orf183Q5T699 404 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 RAB12Q6IQ22 244 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 NANOGP1Q8N7R0 232 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 UBALD1Q8TB05 177 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 CHPT1Q8WUD6 406 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 PHF21AQ96BD5 680 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 TRAPPC2LQ9UL33 140 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 ERGIC3Q9Y282 383 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 IGHV3-43A0A0B4J1X8 118 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 SPINT2O43291 252 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 CA11O75493 328 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 IGHV3-43DP0DP04 118 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 MGMTP16455 207 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 REG1BP48304 166 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 LOXL3P58215 753 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 EBI3Q14213 229 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 SYT6Q5T7P8 510 aaPredicted RBP13.76□□□□□ -0.21
PRKN-208ENST00000610470 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 IZUMO1Q8IYV9 350 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 UQCC2Q9BRT2 126 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 SELENOIQ9C0D9 397 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 BANF2Q9H503 90 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 GHRLQ9UBU3 117 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 PEX16Q9Y5Y5 336 aa13.76□□□□□ -0.21
PRKN-208ENST00000610470 SERPINE3A8MV23 424 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 PIN1P1O15428 100 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 CRTAPO75718 401 aaPredicted RBP13.75□□□□□ -0.21
PRKN-208ENST00000610470 GLAP06280 429 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 IGLL1P15814 213 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 SLC35A2P78381 396 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 Q6ZPA2 131 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 LYPD6Q86Y78 171 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 FOXRED2Q8IWF2 684 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 GAPTQ8N292 157 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 OR2T10Q8NGZ9 312 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 OR4K15Q8NH41 348 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 MRAPQ8TCY5 172 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 GNG12Q9UBI6 72 aa13.75□□□□□ -0.21
PRKN-208ENST00000610470 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 TXNL1O43396 289 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 IGHG2P01859 326 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 FUT3P21217 361 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 SLC35B1P78383 322 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 FOXB2Q5VYV0 432 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 RNLSQ5VYX0 342 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 MS4A15Q8N5U1 240 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 TMEM104Q8NE00 496 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 OR51D1Q8NGF3 324 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 RTN4IP1Q8WWV3 396 aaPredicted RBP13.74□□□□□ -0.21
PRKN-208ENST00000610470 TFAP2CQ92754 450 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 ST6GALNAC6Q969X2 333 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
PRKN-208ENST00000610470 EAF1Q96JC9 268 aaPredicted RBP13.74□□□□□ -0.21
PRKN-208ENST00000610470 Q96M66 194 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 CST11Q9H112 138 aa13.74□□□□□ -0.21
PRKN-208ENST00000610470 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 SC5DO75845 299 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 DUS4LO95620 317 aaKnown RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 HBZP02008 142 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 CDK1P06493 297 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 CD1BP29016 333 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 AQP4P55087 323 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 GPR50Q13585 617 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 FAM53AQ6NSI3 398 aaPredicted RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 TGIF2LXQ8IUE1 241 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 PRR18Q8N4B5 295 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 COMMD1Q8N668 190 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 Q8N6K4 173 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 NOL4LQ96MY1 436 aaPredicted RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 AURKAIP1Q9NWT8 199 aaPredicted RBP13.73□□□□□ -0.21
PRKN-208ENST00000610470 KCNIP1Q9NZI2 227 aa13.73□□□□□ -0.21
PRKN-208ENST00000610470 SLC31A2O15432 143 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 PDCD6O75340 191 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 UBBP0CG47 229 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 ZNF137PP52743 207 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
PRKN-208ENST00000610470 ACSM3Q53FZ2 586 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 STEAP3Q658P3 488 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 ZNF554Q86TJ5 538 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 ZNF439Q8NDP4 499 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 OR10V1Q8NGI7 309 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 OR1L1Q8NH94 360 aa13.72□□□□□ -0.21
PRKN-208ENST00000610470 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
PRKN-208ENST00000610470 UBE2QL1A1L167 161 aa13.71□□□□□ -0.21
PRKN-208ENST00000610470 ATP6V1G2O95670 118 aa13.71□□□□□ -0.21
PRKN-208ENST00000610470 MOSP00540 346 aa13.71□□□□□ -0.21
PRKN-208ENST00000610470 RCC1P18754 421 aaPredicted RBP13.71□□□□□ -0.21
PRKN-208ENST00000610470 SLC6A1P30531 599 aa13.71□□□□□ -0.21
PRKN-208ENST00000610470 VHLP40337 213 aa13.71□□□□□ -0.21
PRKN-208ENST00000610470 CT45A1Q5HYN5 189 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms