RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PRSS8Q16651 343 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 KLHL12Q53G59 568 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 AVPI1Q5T686 147 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 SMIM20Q8N5G0 67 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ATPAF2Q8N5M1 289 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 RNASE11Q8TAA1 199 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 CD200R1Q8TD46 325 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 KCTD4Q8WVF5 259 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ASB17Q8WXJ9 295 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PTX4Q96A99 478 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 DCPSQ96C86 337 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 L3HYPDHQ96EM0 354 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 SMIM12Q96EX1 92 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 MRAP2Q96G30 205 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 TSC22D3Q99576 134 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 HSD17B10Q99714 261 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 AIF1LQ9BQI0 150 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 MED18Q9BUE0 208 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 MS4A8Q9BY19 250 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PECRQ9BY49 303 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 OR51I1Q9H343 314 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 VSIRQ9H7M9 311 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 TAS2R13Q9NYV9 303 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 IDI2-AS1Q9NZ38 188 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 GSKIPQ9P0R6 139 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF835Q9Y2P0 537 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 CARHSP1Q9Y2V2 147 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ASB4Q9Y574 426 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 HEY1Q9Y5J3 304 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 RFNGQ9Y644 331 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 CD109Q6YHK3 1445 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 RTL9Q8NET4 1388 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 IGHV1OR15-9A0A0B4J2B8 117 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PQLC2LA1A4F0 135 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 GABRPO00591 440 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 BHLHE40O14503 412 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF207O43670 478 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 FBP1P09467 338 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 LINC00869P0C866 280 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF286BP0CG31 522 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PGA4P0DJD7 388 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PGA3P0DJD8 388 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PGA5P0DJD9 388 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 MYL12AP19105 171 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 CXCR1P25024 350 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TSPOP30536 169 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 CA5AP35218 305 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ARL2P36404 184 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 GZMMP51124 257 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TCL1AP56279 114 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 SYNJ2BPP57105 145 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR12D2P58182 307 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 RPS23P62266 143 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 HIST1H3AP68431 136 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 H3F3AP84243 136 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PSG4Q00888 419 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF266Q14584 549 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TSNQ15631 228 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 CEACAM16Q2WEN9 425 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 LIN52Q52LA3 116 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TCEAL5Q5H9L2 206 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 N4BP2L1Q5TBK1 243 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 SHISA6Q6ZSJ9 500 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 FAM231DQ6ZW35 169 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 HIST2H3AQ71DI3 136 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 GRINAQ7Z429 371 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 LRRC28Q86X40 367 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR8G5Q8NG78 346 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR11H7Q8NGC8 314 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR4K5Q8NGD3 323 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR1L8Q8NGR8 309 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 OR4K15Q8NH41 348 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZFAND1Q8TCF1 268 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 RGP1Q92546 391 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TCEAL3Q969E4 200 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TAMM41Q96BW9 452 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 C12orf43Q96C57 262 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 DDIT4LQ96D03 193 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZMYND19Q96E35 227 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ZHX1-C8orf76Q96EF9 292 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 NEURL3Q96EH8 262 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 DYNLL2Q96FJ2 89 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 CPNE2Q96FN4 548 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 QKIQ96PU8 341 aaKnown RBP eCLIP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 VAT1Q99536 393 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 PHB2Q99623 299 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TAPBPLQ9BX59 468 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 RSPO3Q9BXY4 272 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 DCSTAMPQ9H295 470 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 ARV1Q9H2C2 271 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 NMNAT1Q9HAN9 279 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 BIN3Q9NQY0 253 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 DDIT4Q9NX09 232 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 COA4Q9NYJ1 87 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 TAS2R5Q9NYW4 299 aa2.47□□□□□ -2.01
SMCHD1-213ENST00000609587 JPT1Q9UK76 154 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms