RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 STOML3Q8TAV4 291 aa4.37□□□□□ -1.71
SCARNA15-201ENST00000607520 NMNAT2Q9BZQ4 307 aa4.37□□□□□ -1.71
SCARNA15-201ENST00000607520 POFUT1Q9H488 388 aa4.37□□□□□ -1.71
SCARNA15-201ENST00000607520 U3KQ87 197 aa4.37□□□□□ -1.71
SCARNA15-201ENST00000607520 TNRC6AQ8NDV7 1962 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 MKI67P46013 3256 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 A0A0A6YYH2 397 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 A6NJ64 397 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ZNF729A6NN14 1252 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 TEX46H3BTG2 121 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 IGLV1-44P01699 117 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 S100A9P06702 114 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 S100A6P06703 90 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 FGF12P61328 243 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 RPS27AP62979 156 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 UBA52P62987 128 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 MEF2CQ06413 473 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 EXOSC2Q13868 293 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SLC9A3R2Q15599 337 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 LINC01590Q5TEZ4 76 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 STUMQ69YW2 141 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 TMUB2Q71RG4 321 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SAXO1Q8IYX7 474 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PRSS35Q8N3Z0 413 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR9G1Q8NH87 305 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 UBALD1Q8TB05 177 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 TMEM158Q8WZ71 300 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ODAMA1E959 279 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SHISA9B4DS77 424 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SYNGR1O43759 233 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 LY86O95711 162 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 HRASP01112 189 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CD1AP06126 327 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 VDAC1P21796 283 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 BMI1P35226 326 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SSBP1Q04837 148 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 IL24Q13007 206 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PRAMEF5Q5TYX0 476 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 WDR25Q64LD2 544 aaPredicted RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CDH26Q8IXH8 852 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 RFLNBQ8N5W9 214 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR52B4Q8NGK2 314 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CHAC2Q8WUX2 184 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 MSI2Q96DH6 328 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PGLYRP3Q96LB9 341 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 AMELYQ99218 206 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ABCA2Q9BZC7 2435 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PIPOXQ9P0Z9 390 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 DPM3Q9P2X0 92 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PSG11Q9UQ72 335 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 KLHDC2Q9Y2U9 406 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 IGHV3-43A0A0B4J1X8 118 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ANKRD20A5PA0PJZ0 165 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CEBPZOSA8MTT3 80 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 KRBOX1C9JBD0 128 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 K7N7A8 449 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PMP2P02689 132 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 HOXB5P09067 269 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR4E1P0C645 316 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR8U9P0C7N5 309 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 IGHV3-43DP0DP04 118 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 TPT1P13693 172 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CXCL3P19876 107 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 CEACAM6P40199 344 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 LGALS7P47929 136 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 EFNB1P98172 346 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 GNMTQ14749 295 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 MPPED2Q15777 294 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 FAM216BQ8N7L0 139 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 POC1AQ8NBT0 407 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR4X2Q8NGF9 303 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR10R2Q8NGX6 335 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 OR8U1Q8NH10 309 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 SCARB1Q8WTV0 552 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 RBPMSQ93062 196 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 NABP1Q96AH0 204 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 GNB4Q9HAV0 340 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 FAM206AQ9NX38 181 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 PRRC2AP48634 2157 aaKnown RBP4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 ADAMTS20P59510 1910 aa4.36□□□□□ -1.71
SCARNA15-201ENST00000607520 HEATR5AQ86XA9 2040 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 C7orf66A4D0T2 115 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 H0YL77 283 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 HLA-DQB1P01920 261 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 TMEM11P17152 192 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 MMDQ15546 238 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 RTN4RL2Q86UN3 420 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 OR10AC1Q8NH08 325 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 OR5R1Q8NH85 324 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 NUDCD2Q8WVJ2 157 aa4.35□□□□□ -1.71
SCARNA15-201ENST00000607520 AQP3Q92482 292 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms