RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 IGHV3-7P01780 117 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 RBP4P02753 201 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 SCTP09683 121 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 IGHV3-43DP0DP04 118 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 FOSL1P15407 271 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 HOXB4P17483 251 aaPredicted RBP6.29□□□□□ -1.4
MSH6-211ENST00000606499 GZMHP20718 246 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 GATA3P23771 443 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 NFYBP25208 207 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 ETV6P41212 452 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 PAX8Q06710 450 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 HERPUD1Q15011 391 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 PYDC2Q56P42 97 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 IGSF11Q5DX21 431 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 TRAT1Q6PIZ9 186 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 HEPN1Q6WQI6 88 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 C1orf229Q6ZS94 237 aaPredicted RBP6.29□□□□□ -1.4
MSH6-211ENST00000606499 IL17RELQ6ZVW7 336 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 HOGA1Q86XE5 327 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 PDZD9Q8IXQ8 264 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 BEST4Q8NFU0 473 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 GPX8Q8TED1 209 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 SMIM4Q8WVI0 70 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 KIRREL1Q96J84 757 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 OCSTAMPQ9BR26 566 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 SUCNR1Q9BXA5 334 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 C7orf69Q9H7B7 122 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 METTL8Q9H825 291 aaKnown RBP6.29□□□□□ -1.4
MSH6-211ENST00000606499 LINC00574Q9H8X3 128 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 SCPEP1Q9HB40 452 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 YAE1D1Q9NRH1 226 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 IDI2-AS1Q9NZ38 188 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 KCNIP1Q9NZI2 227 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 OR1A1Q9P1Q5 309 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 KLK11Q9UBX7 282 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 KCNS2Q9ULS6 477 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 ANAPC10Q9UM13 185 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 KPTNQ9Y664 436 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 AUP1Q9Y679 476 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 TEP1Q99973 2627 aaKnown RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 IGHV3OR16-10A0A075B7F0 116 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 TRAV40A0A0B4J280 105 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 hCG_1809904A0A1W2PP81 198 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 A0A1W2PPE2 198 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 A0A1W2PR64 198 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 A0A1W2PRV1 198 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 TRDCB7Z8K6 153 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 RNASEK-C17orf49H0YIS7 233 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 GABARAPH6UMI1 98 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 J3QLI3 93 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 F2RL2O00254 374 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 SDCBPO00560 298 aaPredicted RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 BET1O15155 118 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 CTDSPLO15194 276 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 FABP7O15540 132 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 LANCL1O43813 399 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 TPPPO94811 219 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 GSTT2P0CG29 244 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 GSTT2BP0CG30 244 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 COX7A1P24310 79 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 FPR2P25090 351 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 PPP1CCP36873 323 aaKnown RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 KIR2DS4P43632 304 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 CBX5P45973 191 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 LOXL3P58215 753 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 MRPS10P82664 201 aaKnown RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 KLF17Q5JT82 389 aaPredicted RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 HCP5Q6MZN7 132 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 Q6ZS49 121 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 Q71RC1 249 aaPredicted RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 ZNF554Q86TJ5 538 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 PNKDQ8N490 385 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 OR52L2PQ8NGH6 319 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 OR10V1Q8NGI7 309 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 C15orf40Q8WUR7 153 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 FCAMRQ8WWV6 532 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 TNFRSF14Q92956 283 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 LHX4Q969G2 390 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 UPRTQ96BW1 309 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 DMRTB1Q96MA1 342 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 SRRQ9GZT4 340 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 PARP12Q9H0J9 701 aaKnown RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 TMEM133Q9H2Q1 129 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 GSX1Q9H4S2 264 aaPredicted RBP6.28□□□□□ -1.4
MSH6-211ENST00000606499 ZNF286AQ9HBT8 521 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 ZNRD1Q9P1U0 126 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 ANXA10Q9UJ72 324 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 MGAT4AQ9UM21 535 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 SESN1Q9Y6P5 492 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 KIAA2026Q5HYC2 2103 aa6.28□□□□□ -1.4
MSH6-211ENST00000606499 A0A1W2PRD5 423 aa6.27□□□□□ -1.41
MSH6-211ENST00000606499 A0A1W2PRF3 423 aa6.27□□□□□ -1.41
MSH6-211ENST00000606499 A0A1W2PRM7 423 aa6.27□□□□□ -1.41
MSH6-211ENST00000606499 POM121CA8CG34 1229 aa6.27□□□□□ -1.41
MSH6-211ENST00000606499 A8MV72 311 aaPredicted RBP6.27□□□□□ -1.41
MSH6-211ENST00000606499 SULT1C2O00338 296 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms