RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CT45A1Q5HYN5 189 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 RBM48Q5RL73 367 aaKnown RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 SYT6Q5T7P8 510 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 C6orf201Q7Z4U5 140 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 NR2C2APQ86WQ0 139 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 C1QL4Q86Z23 238 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 MS4A15Q8N5U1 240 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 Q8N6K4 173 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 NKAIN3Q8N8D7 197 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 CT45A3Q8NHU0 189 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 MRPS24Q96EL2 167 aaKnown RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 MGLLQ99685 303 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 CITED2Q99967 270 aaPredicted RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 SLC25A33Q9BSK2 321 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 MMP27Q9H306 513 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 ISYNA1Q9NPH2 558 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 MBNL3Q9NUK0 354 aaKnown RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 SCN3BQ9NY72 215 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 ETAA1Q9NY74 926 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 TPRKBQ9Y3C4 175 aa8.48□□□□□ -1.05
TUBE1-210ENST00000604967 AK6Q9Y3D8 172 aaKnown RBP8.48□□□□□ -1.05
TUBE1-210ENST00000604967 SDCBPO00560 298 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-210ENST00000604967 LDLRAD4O15165 306 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 PDCD6O75340 191 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 LPLP06858 475 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 SNRPBP14678 240 aaKnown RBP8.47□□□□□ -1.05
TUBE1-210ENST00000604967 FUT3P21217 361 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 MAPK3P27361 379 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-210ENST00000604967 PRRX1P54821 245 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 OR10A3P58181 314 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 MLLT11Q13015 90 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-210ENST00000604967 GPR176Q14439 515 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 ABCA11PQ4W5N1 156 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 ODF3L1Q8IXM7 274 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 LINC00311Q8N616 119 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 OR10A7Q8NGE5 316 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 OR52L2PQ8NGH6 319 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 OR10V1Q8NGI7 309 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 NEK7Q8TDX7 302 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 UFD1Q92890 307 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 TOMM40LQ969M1 308 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 S100A13Q99584 98 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 HDHD3Q9BSH5 251 aaPredicted RBP8.47□□□□□ -1.05
TUBE1-210ENST00000604967 FAAP24Q9BTP7 215 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 TM2D1Q9BX74 207 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 PRSS22Q9GZN4 317 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 CCDC90BQ9GZT6 254 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 LPAR5Q9H1C0 372 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 LIN7BQ9HAP6 207 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 ACOT13Q9NPJ3 140 aa8.47□□□□□ -1.05
TUBE1-210ENST00000604967 A0A0B4J203 849 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 IGHV1-3A0A0C4DH29 117 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 FAM90A10PA6NDY2 464 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 FAM90A7PA6NKC0 464 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 FAM90A23PA8MXZ1 464 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 OOSP1A8MZH6 123 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 MCRIP1C9JLW8 97 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 HSD17B6O14756 317 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 SOCS1O15524 211 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 GZMHP20718 246 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 TMEM50BP56557 158 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 DEFA6Q01524 100 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 EMX1Q04741 257 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-210ENST00000604967 ZNF816Q0VGE8 651 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-210ENST00000604967 MADCAM1Q13477 382 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 EBI3Q14213 229 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 HNF4GQ14541 408 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 TBCEQ15813 527 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-210ENST00000604967 C11orf88Q6PI97 169 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 SLC25A48Q6ZT89 311 aaKnown RBP8.46□□□□□ -1.06
TUBE1-210ENST00000604967 OR52M1Q8NGK5 317 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 CAPSLQ8WWF8 208 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 RITA1Q96K30 269 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 TAF9BQ9HBM6 251 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 PLSCR3Q9NRY6 295 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 PITPNC1Q9UKF7 332 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 RAB26Q9ULW5 256 aa8.46□□□□□ -1.06
TUBE1-210ENST00000604967 G3V4G9 280 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 SLC17A2O00624 439 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 NAPSAO96009 420 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 IGKV1D-33P01593 117 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 IGKV1-33P01594 117 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 CSF1P09603 554 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 BRS3P32247 399 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 PPP1CCP36873 323 aaKnown RBP8.45□□□□□ -1.06
TUBE1-210ENST00000604967 CEACAM3P40198 252 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 VDAC2P45880 294 aaPredicted RBP8.45□□□□□ -1.06
TUBE1-210ENST00000604967 CD83Q01151 205 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 PLAC9Q5JTB6 97 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 NKAPLQ5M9Q1 402 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 ZNF880Q6PDB4 577 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 CD200R1LQ6Q8B3 271 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 SLC16A12Q6ZSM3 486 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 Q6ZTK2 550 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 THNSL2Q86YJ6 484 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 PRR18Q8N4B5 295 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 SVOPQ8N4V2 548 aa8.45□□□□□ -1.06
TUBE1-210ENST00000604967 FAM89BQ8N5H3 189 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms