RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 WDR5BQ86VZ2 330 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 CLEC18CQ8NCF0 446 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 OR4F5Q8NH21 305 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
CDCA3-212ENST00000604599 OR4F4Q96R69 305 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 LRRC61Q9BV99 259 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 RBM24Q9BX46 236 aaKnown RBP10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SLC25A22Q9H936 323 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SPTBN5Q9NRC6 3674 aaKnown RBP10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SPTY2D1-AS1A0A0U1RR47 76 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 HSPB6O14558 160 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SCTP09683 121 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 IL3RAP26951 378 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 MLF1P58340 268 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 HIST1H3AP68431 136 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 PLPPR5Q32ZL2 321 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 CISD2Q8N5K1 135 aaKnown RBP10.67□□□□□ -0.7
CDCA3-212ENST00000604599 ZNF525Q8N782 197 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 OR51H1Q8NH63 302 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 OXGR1Q96P68 337 aa10.67□□□□□ -0.7
CDCA3-212ENST00000604599 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 SIAH2O43255 324 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 IGKV1D-33P01593 117 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 IGKV1-33P01594 117 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 GYPAP02724 150 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 CCL5P13501 91 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 TMEM41BQ5BJD5 291 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 OR1K1Q8NGR3 316 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 OR2J1Q9GZK6 312 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 TRAPPC1Q9Y5R8 145 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 GRIFINA4D1Z8 144 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 CNN3Q15417 329 aaKnown RBP10.66□□□□□ -0.7
CDCA3-212ENST00000604599 CENPVQ7Z7K6 275 aaPredicted RBP10.66□□□□□ -0.7
CDCA3-212ENST00000604599 RPP25LQ8N5L8 163 aaKnown RBP10.66□□□□□ -0.7
CDCA3-212ENST00000604599 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 RASL10BQ96S79 203 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 RNF150Q9ULK6 438 aa10.66□□□□□ -0.7
CDCA3-212ENST00000604599 A0A0U1RQK1 487 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 ZNF320A2RRD8 509 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 SUMO3P55854 103 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 SHBQ15464 509 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 HAPLN4Q86UW8 402 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 MRGPRX4Q96LA9 322 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 MIEN1Q9BRT3 115 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 IGHV3-15A0A0B4J1V0 119 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 TLX3O43711 291 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 PDGFBP01127 241 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 TYMSP04818 313 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 IL6RP08887 468 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 OTX1P32242 354 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 PSMB3P49720 205 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 RBM11P57052 281 aaKnown RBP10.65□□□□□ -0.7
CDCA3-212ENST00000604599 OR8B8Q15620 311 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 TMEM211Q6ICI0 200 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 Q6ZRM9 215 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 ASCL3Q9NQ33 180 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 MANBALQ9NQG1 85 aa10.65□□□□□ -0.7
CDCA3-212ENST00000604599 NRASP01111 189 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 CD82P27701 267 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 KCNIP4Q6PIL6 250 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 TCF23Q7RTU1 214 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 ZNF296Q8WUU4 475 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 EXTL1Q92935 676 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 SPTSSAQ969W0 71 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 GPR35Q9HC97 309 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 PSENENQ9NZ42 101 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 PPIAL4AQ9Y536 164 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 IGHV4-34P06331 123 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 MSX1P28360 303 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 SERF2P84101 59 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 LHFPL2Q6ZUX7 228 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 Q6ZWC4 215 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 C11orf42Q8N5U0 333 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 OR5D13Q8NGL4 314 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 OR1L3Q8NH93 324 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 NABP1Q96AH0 204 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 ZNF385AQ96PM9 386 aaKnown RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 OR4C12Q96R67 309 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 CACNG5Q9UF02 275 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 HS3ST3A1Q9Y663 406 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 TCRBV21S2A2A0A5A6 115 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms