RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GAPTQ8N292 157 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 CCDC107Q8WV48 283 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 ZNF581Q9P0T4 197 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 PSG11Q9UQ72 335 aa9.29□□□□□ -0.92
CCDC12-209ENST00000604164 ANK2Q01484 3957 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 KIAA2026Q5HYC2 2103 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 TRAV39A0A0B4J263 110 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 CCRL2O00421 344 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 OR2F2O95006 317 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 GNG10P50151 68 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 FABP5Q01469 135 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 EMX1Q04741 257 aaPredicted RBP9.28□□□□□ -0.92
CCDC12-209ENST00000604164 C2orf68Q2NKX9 166 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 NKAPLQ5M9Q1 402 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 STEAP3Q658P3 488 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 CCBE1Q6UXH8 406 aaPredicted RBP9.28□□□□□ -0.92
CCDC12-209ENST00000604164 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 LINC00311Q8N616 119 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 OR4K15Q8NH41 348 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 TM2D1Q9BX74 207 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
CCDC12-209ENST00000604164 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 GFOD1Q9NXC2 390 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 V9GY05 133 aa9.28□□□□□ -0.92
CCDC12-209ENST00000604164 FBN3Q75N90 2809 aa9.27□□□□□ -0.92
CCDC12-209ENST00000604164 TRAV1-2A0A0B4J238 106 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 TMEM14DPA8MWL7 114 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 C12orf77C9JDV5 145 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 TXNL1O43396 289 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 RGS11O94810 467 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 GAPDHP04406 335 aaKnown RBP9.27□□□□□ -0.93
CCDC12-209ENST00000604164 CHATP28329 748 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
CCDC12-209ENST00000604164 UBE2UQ5VVX9 321 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 SIGIRRQ6IA17 410 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 MOB1BQ7L9L4 216 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 KLHDC1Q8N7A1 406 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 LEAP2Q969E1 77 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 RBM14Q96PK6 669 aaKnown RBP9.27□□□□□ -0.93
CCDC12-209ENST00000604164 SLC25A33Q9BSK2 321 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 ZNF702PQ9H963 129 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 MBNL3Q9NUK0 354 aaKnown RBP9.27□□□□□ -0.93
CCDC12-209ENST00000604164 ABRACLQ9P1F3 81 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 MGAT4AQ9UM21 535 aa9.27□□□□□ -0.93
CCDC12-209ENST00000604164 AK6Q9Y3D8 172 aaKnown RBP9.27□□□□□ -0.93
CCDC12-209ENST00000604164 TRDV1A0A1B0GX56 115 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 HSD17B6O14756 317 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 IGHV3-7P01780 117 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 HBZP02008 142 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 VSIG10L2P0DP72 767 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 VDAC2P45880 294 aaPredicted RBP9.26□□□□□ -0.93
CCDC12-209ENST00000604164 LOXL3P58215 753 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 QRFPP83859 136 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 HTD2P86397 168 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 SRSF4Q08170 494 aaKnown RBP9.26□□□□□ -0.93
CCDC12-209ENST00000604164 ZNF816Q0VGE8 651 aaPredicted RBP9.26□□□□□ -0.93
CCDC12-209ENST00000604164 P2RY14Q15391 338 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 CD200R1LQ6Q8B3 271 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 PRR18Q8N4B5 295 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 GALMQ96C23 342 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 MMP27Q9H306 513 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 CHMP1AQ9HD42 196 aaPredicted RBP9.26□□□□□ -0.93
CCDC12-209ENST00000604164 OR2S2Q9NQN1 319 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 STEAP1Q9UHE8 339 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 HSF4Q9ULV5 492 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 MOB4Q9Y3A3 225 aa9.26□□□□□ -0.93
CCDC12-209ENST00000604164 RRP15Q9Y3B9 282 aaKnown RBP9.26□□□□□ -0.93
CCDC12-209ENST00000604164 TENM1Q9UKZ4 2725 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 JUNBP17275 347 aaPredicted RBP9.25□□□□□ -0.93
CCDC12-209ENST00000604164 RCC1P18754 421 aaPredicted RBP9.25□□□□□ -0.93
CCDC12-209ENST00000604164 PSMB9P28065 219 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 MRPS15P82914 257 aaKnown RBP9.25□□□□□ -0.93
CCDC12-209ENST00000604164 UNC119Q13432 240 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 HES1Q14469 280 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SSX1Q16384 188 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 OR10K2Q6IF99 312 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 ZNF773Q6PK81 442 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SLC25A48Q6ZT89 311 aaKnown RBP9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SPARTQ8N0X7 666 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 DRAM1Q8N682 238 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 OR56B1Q8NGI3 324 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 OR56B4Q8NH76 319 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 MRPL30Q8TCC3 161 aaKnown RBP9.25□□□□□ -0.93
CCDC12-209ENST00000604164 FAM3DQ96BQ1 224 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 FAAP24Q9BTP7 215 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SERTAD4Q9NUC0 356 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 RAB22AQ9UL26 194 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
CCDC12-209ENST00000604164 A0A1W2PPI3 338 aa9.24□□□□□ -0.93
CCDC12-209ENST00000604164 FBXO24O75426 580 aa9.24□□□□□ -0.93
CCDC12-209ENST00000604164 SNRNP70P08621 437 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms