RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 MCRIP1C9JLW8 97 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 HSD17B6O14756 317 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 ORC5O43913 435 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 CRTAPO75718 401 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 MT-ND4P03905 459 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 IGHV3-43DP0DP04 118 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 GABPB1Q06547 395 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 INSL4Q14641 139 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 DEFB121Q5J5C9 76 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 RAB12Q6IQ22 244 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 FAM53AQ6NSI3 398 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 C5orf56Q8N8D9 126 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 TMEM104Q8NE00 496 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 OR52M1Q8NGK5 317 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 NOL4LQ96MY1 436 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 SELENOIQ9C0D9 397 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 GFOD1Q9NXC2 390 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 ETAA1Q9NY74 926 aa16.78■□□□□ 0.28
PPFIA3-209ENST00000602783 IGKV1D-33P01593 117 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 IGKV1-33P01594 117 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 AQP4P55087 323 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 KRTAP10-11P60412 298 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 LINC00482Q8N8I6 264 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 CHPT1Q8WUD6 406 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 Q96M66 194 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 LINC00527Q9UJ94 153 aa16.77■□□□□ 0.28
PPFIA3-209ENST00000602783 FAM90A10PA6NDY2 464 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 FAM90A7PA6NKC0 464 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 SERPINE3A8MV23 424 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 FAM90A23PA8MXZ1 464 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 C12orf77C9JDV5 145 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 PTGES3LE9PB15 166 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 FGF16O43320 207 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 VHLP40337 213 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 REG1BP48304 166 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 ZNF816Q0VGE8 651 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 FAM27D1Q5T7N8 215 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 SYT6Q5T7P8 510 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 RNLSQ5VYX0 342 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 MRPL41Q8IXM3 137 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 OR51D1Q8NGF3 324 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 OR4K15Q8NH41 348 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 FAM46BQ96A09 425 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 CYYR1Q96J86 154 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 UQCC2Q9BRT2 126 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 TMED9Q9BVK6 235 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 TRAPPC2LQ9UL33 140 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 LSM2Q9Y333 95 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 PEX16Q9Y5Y5 336 aa16.76■□□□□ 0.27
PPFIA3-209ENST00000602783 WI2-2373I1.2A0A1W2PRP0 233 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 CCRL2O00421 344 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 HOXD3P31249 432 aaPredicted RBP16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 RPL23AP62750 156 aaKnown RBP16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 GPR50Q13585 617 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 ACSM3Q53FZ2 586 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 C6orf183Q5T699 404 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 ETV3LQ6ZN32 361 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 MOB3BQ86TA1 216 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 LINC00311Q8N616 119 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 C8orf31Q8N9H6 132 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 NRG4Q8WWG1 115 aa16.75■□□□□ 0.27
PPFIA3-209ENST00000602783 IGHV1-3A0A0C4DH29 117 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 SC5DO75845 299 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 GAPDHP04406 335 aaKnown RBP16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 GP2P55259 537 aaKnown RBP16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 RBM48Q5RL73 367 aaKnown RBP16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 SIGIRRQ6IA17 410 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 UNQ9370/PRO34162Q6UXP9 181 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 C18orf65Q6ZTR6 163 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 OR2W3Q7Z3T1 314 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 SLC35E3Q7Z769 313 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 GAPTQ8N292 157 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 PRR18Q8N4B5 295 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 MS4A15Q8N5U1 240 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 SCN3BQ9NY72 215 aa16.74■□□□□ 0.27
PPFIA3-209ENST00000602783 IGHV3-72A0A0B4J1Y9 119 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 UBE2QL1A1L167 161 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 SLC31A2O15432 143 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 SPINT2O43291 252 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 IGHG2P01859 326 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 HBZP02008 142 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 FUT3P21217 361 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 IL3RAP26951 378 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 THBS3P49746 956 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 SLC35B1P78383 322 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 EGFEM1PQ0D2K5 195 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 SPHARQ15513 63 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 MED22Q15528 200 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 Q3ZCU0 254 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 C8orf86Q6ZUL3 223 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 LRRTM1Q86UE6 522 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 ZNF439Q8NDP4 499 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 OR10V1Q8NGI7 309 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 OR1L1Q8NH94 360 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 CST11Q9H112 138 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 RAB9BQ9NP90 201 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 ZFP57Q9NU63 452 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 GNG12Q9UBI6 72 aa16.73■□□□□ 0.27
PPFIA3-209ENST00000602783 GHRLQ9UBU3 117 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms