RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 TEX36Q5VZQ5 186 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 CLEC9AQ6UXN8 241 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 FAM185AQ8N0U4 392 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 OR2AK2Q8NG84 335 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 MARCH1Q8TCQ1 289 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 MITD1Q8WV92 249 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 NEU4Q8WWR8 484 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-211ENST00000600927 MOB3AQ96BX8 217 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 HYLS1Q96M11 299 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 PHB2Q99623 299 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 SEC22CQ9BRL7 303 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 FAM234AQ9H0X4 552 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 C5orf66Q9H5L9 145 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RANGRFQ9HD47 186 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF69Q9UC07 566 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 FN1P02751 2386 aaKnown RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 NAV3Q8IVL0 2385 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 BOLA2-SMG1P6H3BVE0 249 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 PSG2P11465 335 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 GZMHP20718 246 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 HLA-DRB3P79483 266 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 CD83Q01151 205 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 SRSF4Q08170 494 aaKnown RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 LOXL1Q08397 574 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 DHRS2Q13268 280 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 ZFP69Q49AA0 526 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 C6orf183Q5T699 404 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 TMED4Q7Z7H5 227 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 NOXA1Q86UR1 476 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 MOGAT3Q86VF5 341 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 SLC38A6Q8IZM9 456 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 ZCCHC24Q8N2G6 241 aaKnown RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 MUC20Q8N307 709 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF561Q8N587 486 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 MAPK1IP1LQ8NDC0 245 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 OR11H7Q8NGC8 314 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 MAFIPQ8WZ33 124 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 FAM168AQ92567 244 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 DYRK2Q92630 601 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 SDSLQ96GA7 329 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 VRK1Q99986 396 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 RTBDNQ9BSG5 229 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF436Q9C0F3 470 aaPredicted RBP9.61□□□□□ -0.87
ZNF548-211ENST00000600927 RAB1BQ9H0U4 201 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 DNAJB11Q9UBS4 358 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
ZNF548-211ENST00000600927 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 OOEPA6NGQ2 149 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 SIRPB1O00241 398 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 MGST3O14880 152 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 WNT9BO14905 357 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 PSPNO60542 156 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF737O75373 536 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 SFT2D2O95562 160 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
ZNF548-211ENST00000600927 WNT2P09544 360 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF728P0DKX0 622 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 PGAM2P15259 253 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 HOXB4P17483 251 aaPredicted RBP9.6□□□□□ -0.87
ZNF548-211ENST00000600927 FCGR2CP31995 323 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 GZMKP49863 264 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 NPY4RP50391 375 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 PDLIM4P50479 330 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 HERV-K104P61576 105 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 RND3P61587 244 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 CD300CQ08708 224 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 HMGN3Q15651 99 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 MSMO1Q15800 293 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 LIN54Q6MZP7 749 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 Q6ZPA2 131 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 C17orf107Q6ZR85 190 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 KCTD9Q7L273 389 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 BATF2Q8N1L9 274 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 CCDC71LQ8N9Z2 235 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 ANGPTL6Q8NI99 470 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 PLPPR1Q8TBJ4 325 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 GALNT14Q96FL9 552 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 FYTTD1Q96QD9 318 aaKnown RBP9.6□□□□□ -0.87
ZNF548-211ENST00000600927 RSRP1Q9BUV0 290 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 BEX2Q9BXY8 128 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 SHARPINQ9H0F6 387 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 BEX1Q9HBH7 125 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 DYNLRB1Q9NP97 96 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 MGAT4CQ9UBM8 478 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 OR14J1Q9UGF5 321 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF222Q9UK12 451 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 TRAPPC2LQ9UL33 140 aa9.6□□□□□ -0.87
ZNF548-211ENST00000600927 CSPG4Q6UVK1 2322 aa9.59□□□□□ -0.87
ZNF548-211ENST00000600927 IGKV1D-17A0A075B6S4 117 aa9.59□□□□□ -0.87
ZNF548-211ENST00000600927 TRAV38-1A0A0B4J264 116 aa9.59□□□□□ -0.87
ZNF548-211ENST00000600927 DBX1A6NMT0 343 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms