RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 WFDC5Q8TCV5 224 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SCGB1C1Q8TD33 95 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 DAZLQ92904 295 aaKnown RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SPACA5Q96QH8 159 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 TM2D1Q9BX74 207 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 LRTM2Q8N967 370 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 NEUROG1Q92886 237 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 AICDAQ9GZX7 198 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 GNB4Q9HAV0 340 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 TP73-AS1Q9UF72 201 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 ADM5C9JUS6 153 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 FCN1O00602 326 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 STC2O76061 302 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SMIM17P0DL12 118 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 FBLP22087 321 aaKnown RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 EMDP50402 254 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 FUT6P51993 359 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 RRADP55042 308 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
NFKB1-212ENST00000600343 PDGFRLQ15198 375 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 C9orf135Q5VTT2 229 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 SLC25A40Q8TBP6 338 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 KLHDC7BQ96G42 594 aa8.49□□□□□ -1.05
NFKB1-212ENST00000600343 PHF1O43189 567 aaPredicted RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 TLX3O43711 291 aaPredicted RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 CA2P00918 260 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 CELA3BP08861 270 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 CST5P28325 142 aaPredicted RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 MDH2P40926 338 aaKnown RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 HSD52Q0P140 79 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 TCTEX1D4Q5JR98 221 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 LINC00114Q6XXX2 140 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 COLCA1Q6ZS62 124 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 HAPLN4Q86UW8 402 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 HCFC2Q9Y5Z7 792 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 A0A1W2PP11 408 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 CLEC3AO75596 197 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 BGLAPP02818 100 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 NTF3P20783 257 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 FXYD4P59646 89 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 HERV-K104P63124 156 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF788Q6ZQV5 615 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 C19orf35Q6ZS72 473 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 LRRC25Q8N386 305 aaPredicted RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 SLC39A9Q9NUM3 307 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 A0A1W2PS18 150 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 C4orf51C9J302 202 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF324O75467 553 aaPredicted RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
NFKB1-212ENST00000600343 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 R4GMQ9 66 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 GON4LQ3T8J9 2241 aa8.48□□□□□ -1.05
NFKB1-212ENST00000600343 C7orf71A4D174 169 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 FAM231BA6NCW3 169 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 GRXCR1A8MXD5 290 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 PLPP3O14495 311 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 SELPP16109 830 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 ZNF90Q03938 601 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 ZP4Q12836 540 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CEACAM21Q3KPI0 293 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 MSI2Q96DH6 328 aaKnown RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 SIGLEC12Q96PQ1 595 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 FAM60AQ9NP50 221 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 THAP10Q9P2Z0 257 aaPredicted RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 NXT1Q9UKK6 140 aaKnown RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 K7EQS6 105 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 LIPFP07098 398 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CD1BP29016 333 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 NTHL1P78549 312 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 Q56UQ5 140 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 OR5A2Q8NGI9 324 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CACNG8Q8WXS5 425 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CLEC7AQ9BXN2 247 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 WDR61Q9GZS3 305 aaKnown RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CENPFP49454 3210 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 NXPH3O95157 252 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 LTC4SQ16873 150 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 HNRNPA1L2Q32P51 320 aaKnown RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 FAM57BQ71RH2 274 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 ODF3L1Q8IXM7 274 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 OR51T1Q8NGJ9 327 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 OR4A5Q8NH83 315 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 NINJ1Q92982 152 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 DNAJB12Q9NXW2 375 aaKnown RBP8.47□□□□□ -1.05
NFKB1-212ENST00000600343 TAAR3PQ9P1P4 343 aa8.47□□□□□ -1.05
NFKB1-212ENST00000600343 CD207Q9UJ71 328 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms