RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
UPF1-206ENST00000598471 OCEL1Q9H607 264 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 CALYQ9NYX4 217 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 NUBP2Q9Y5Y2 271 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 DCHS2Q6V1P9 2916 aa12.79□□□□□ -0.36
UPF1-206ENST00000598471 AKAP6Q13023 2319 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 TRBV6-7A0A0A0MS04 114 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 TCRBP04435 133 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 ECI1P42126 302 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 HERV-K104P61576 105 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 PLA1AQ53H76 456 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 CCBE1Q6UXH8 406 aaPredicted RBP12.78□□□□□ -0.36
UPF1-206ENST00000598471 BTN2A1Q7KYR7 527 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 OR1L1Q8NH94 360 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 TERB2Q8NHR7 220 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 CLDND2Q8NHS1 167 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 GIMAP1Q8WWP7 306 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 ZNF2Q9BSG1 426 aaPredicted RBP12.78□□□□□ -0.36
UPF1-206ENST00000598471 ZNF69Q9UC07 566 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 FBN2P35556 2912 aa12.78□□□□□ -0.36
UPF1-206ENST00000598471 KBTBD11-OT1A0A1B0GTJ5 212 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 FAM172BPA6NC97 362 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 VWC2LB2RUY7 222 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 FCN3O75636 299 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 NDUFB6O95139 128 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 ZBTB25P24278 435 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 FCGR2CP31995 323 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 SSTR5P35346 364 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 HTD2P86397 168 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 TMEM200BQ69YZ2 307 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 CREB3L1Q96BA8 519 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
UPF1-206ENST00000598471 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 MEX3AA1L020 520 aaKnown RBP12.76□□□□□ -0.37
UPF1-206ENST00000598471 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 F2RL2O00254 374 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 RGS11O94810 467 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 CGB3P0DN86 165 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 CGB7P0DN87 165 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 SPNP16150 400 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 FPR2P25090 351 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 ZNF273Q14593 569 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 TCF23Q7RTU1 214 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 ZDHHC22Q8N966 263 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 C8orf46Q8TAG6 207 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 IDI2-AS1Q9NZ38 188 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 GNG12Q9UBI6 72 aa12.76□□□□□ -0.37
UPF1-206ENST00000598471 RPUSD1Q9UJJ7 312 aaKnown RBP12.76□□□□□ -0.37
UPF1-206ENST00000598471 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 hCG_1809904A0A1W2PP81 198 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 A0A1W2PPE2 198 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 A0A1W2PR64 198 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 A0A1W2PRV1 198 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
UPF1-206ENST00000598471 PPYP01298 95 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 LIPFP07098 398 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 H2AFB2P0C5Z0 115 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 PGAM2P15259 253 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
UPF1-206ENST00000598471 LMO4P61968 165 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 SURF2Q15527 256 aaPredicted RBP12.75□□□□□ -0.37
UPF1-206ENST00000598471 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
UPF1-206ENST00000598471 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 GLCCI1Q86VQ1 547 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 H1FOOQ8IZA3 346 aaPredicted RBP12.75□□□□□ -0.37
UPF1-206ENST00000598471 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 MMP28Q9H239 520 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 LINC00574Q9H8X3 128 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 OR2S2Q9NQN1 319 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 OR1A1Q9P1Q5 309 aa12.75□□□□□ -0.37
UPF1-206ENST00000598471 TRAV6A0A075B6T7 132 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 A8MXK9 166 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 INMT-MINDY4F8WBC2 141 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 FOXH1O75593 365 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 TUSC2O75896 110 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 DHFRP00374 187 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 RLN1P04808 185 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 AADACP22760 399 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 CEACAM6P40199 344 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 FXYD4P59646 89 aa12.74□□□□□ -0.37
UPF1-206ENST00000598471 LTC4SQ16873 150 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms