RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 UNQ9370/PRO34162Q6UXP9 181 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 Q6ZS46 218 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 LYPD6Q86Y78 171 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 LYG1Q8N1E2 194 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 OR4K15Q8NH41 348 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 CNBD2Q96M20 576 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 TMEM59Q9BXS4 323 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 KCNIP1Q9NZI2 227 aa11.69□□□□□ -0.54
XRCC1-208ENST00000598422 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 A0A1W2PPI3 338 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 UBE2QL1A1L167 161 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 C12orf77C9JDV5 145 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 LPLP06858 475 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 UCHL1P09936 223 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 SRMP19623 302 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 CRHBPP24387 322 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 EMX1Q04741 257 aaPredicted RBP11.68□□□□□ -0.54
XRCC1-208ENST00000598422 MLLT11Q13015 90 aaPredicted RBP11.68□□□□□ -0.54
XRCC1-208ENST00000598422 TRAM1Q15629 374 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 PRSS48Q7RTY5 328 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 MOB3BQ86TA1 216 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 LRRTM1Q86UE6 522 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 THNSL2Q86YJ6 484 aa11.68□□□□□ -0.54
XRCC1-208ENST00000598422 CITED2Q99967 270 aaPredicted RBP11.68□□□□□ -0.54
XRCC1-208ENST00000598422 SH2D7A6NKC9 451 aaPredicted RBP11.67□□□□□ -0.54
XRCC1-208ENST00000598422 ARL6IP5O75915 188 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 IGKV1D-33P01593 117 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 IGKV1-33P01594 117 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 HBZP02008 142 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OPN1MWP04001 364 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 GAPDHP04406 335 aaKnown RBP11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OPN1MW2P0DN77 364 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OPN1MW3P0DN78 364 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 HTR2CP28335 458 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 REG1BP48304 166 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 TPBGQ13641 420 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 DIAPH2-AS1Q14236 149 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 HNF4GQ14541 408 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 Q3ZCU0 254 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 C1orf100Q5SVJ3 147 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
XRCC1-208ENST00000598422 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR5AU1Q8NGC0 362 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR6M1Q8NGM8 313 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 KCNG3Q8TAE7 436 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 OCSTAMPQ9BR26 566 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 ISYNA1Q9NPH2 558 aa11.67□□□□□ -0.54
XRCC1-208ENST00000598422 KCNAB3O43448 404 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 SC5DO75845 299 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 BPNT1O95861 308 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 VSIG8P0DPA2 414 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 RCC1P18754 421 aaPredicted RBP11.66□□□□□ -0.54
XRCC1-208ENST00000598422 MAP2K4P45985 399 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
XRCC1-208ENST00000598422 LOXL3P58215 753 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 RPS25P62851 125 aaKnown RBP11.66□□□□□ -0.54
XRCC1-208ENST00000598422 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
XRCC1-208ENST00000598422 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 OR4X2Q8NGF9 303 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 R3HDM4Q96D70 268 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 MGLLQ99685 303 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 TAF9BQ9HBM6 251 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 CHMP1AQ9HD42 196 aaPredicted RBP11.66□□□□□ -0.54
XRCC1-208ENST00000598422 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 DSCAML1Q8TD84 2053 aa11.66□□□□□ -0.54
XRCC1-208ENST00000598422 IGHV3-72A0A0B4J1Y9 119 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 A0A1W2PRX2 142 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 SLC22A1O15245 554 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 CPEP16870 476 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 RPS27AP62979 156 aaKnown RBP11.65□□□□□ -0.54
XRCC1-208ENST00000598422 TBCEQ15813 527 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-208ENST00000598422 ZNF367Q7RTV3 350 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 ZNF554Q86TJ5 538 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 C1QL4Q86Z23 238 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 GAPTQ8N292 157 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
XRCC1-208ENST00000598422 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
XRCC1-208ENST00000598422 URM1Q9BTM9 101 aaKnown RBP11.65□□□□□ -0.54
XRCC1-208ENST00000598422 RAB26Q9ULW5 256 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 MEGF8Q7Z7M0 2845 aa11.65□□□□□ -0.54
XRCC1-208ENST00000598422 TXNL1O43396 289 aa11.64□□□□□ -0.55
XRCC1-208ENST00000598422 AMY1AP04745 511 aa11.64□□□□□ -0.55
XRCC1-208ENST00000598422 AMY2AP04746 511 aa11.64□□□□□ -0.55
XRCC1-208ENST00000598422 PF4V1P10720 104 aa11.64□□□□□ -0.55
XRCC1-208ENST00000598422 ARSBP15848 533 aa11.64□□□□□ -0.55
XRCC1-208ENST00000598422 CALRP27797 417 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms