RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ZFAND2BQ8WV99 257 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 CMSS1Q9BQ75 279 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 NAA50Q9GZZ1 169 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 DPAGT1Q9H3H5 408 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 RIMS4Q9H426 269 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 TAF9BQ9HBM6 251 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 ETV7Q9Y603 341 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 MINOS1-NBL1R4GNA1 71 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 A0A075B6Q4 140 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 CLDN34H7C241 214 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 SDCBPO00560 298 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 TMEM127O75204 238 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 GABARAPO95166 117 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 IGHV3-7P01780 117 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 HBZP02008 142 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 HTR1DP28221 377 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 MRPS15P82914 257 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 PLAC9Q5JTB6 97 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 SLC16A12Q6ZSM3 486 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 MOB1BQ7L9L4 216 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 TMEM86BQ8N661 226 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 OR9G1Q8NH87 305 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 MALSU1Q96EH3 234 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 MBNL3Q9NUK0 354 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 POMT1Q9Y6A1 747 aa15.95■□□□□ 0.14
SHKBP1-214ENST00000597396 IGHV3-43A0A0B4J1X8 118 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 RAB27BO00194 218 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 F2RL2O00254 374 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 SCGNO76038 276 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 NAPSAO96009 420 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 IGHV4-59P01825 116 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 RNASE1P07998 156 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 CD3GP09693 182 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 IGHV3-43DP0DP04 118 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 PAX6P26367 422 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 IER3P46695 156 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 GNG10P50151 68 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 ZNF554Q86TJ5 538 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 OR52M1Q8NGK5 317 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 OR4P4Q8NGL7 312 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 OR5H6Q8NGV6 325 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 OR1L1Q8NH94 360 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 FAM216AQ8WUB2 273 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 LEAP2Q969E1 77 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 AJUBAQ96IF1 538 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 HDHD3Q9BSH5 251 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 MEGF9Q9H1U4 602 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 RHBDL2Q9NX52 303 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 GFOD1Q9NXC2 390 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 ABRACLQ9P1F3 81 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 SCOCQ9UIL1 159 aa15.94■□□□□ 0.14
SHKBP1-214ENST00000597396 IGLV1-47P01700 117 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 HIST1H1DP16402 221 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 GNB3P16520 340 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 RPL5P46777 297 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 SSX2Q16385 188 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 LRRC75BQ2VPJ9 315 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 HLA-DRB5Q30154 266 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 TMEM30BQ3MIR4 351 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 PLA1AQ53H76 456 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 UTF1Q5T230 341 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 OLFML2AQ68BL7 652 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 CREB3L1Q96BA8 519 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 PHF21AQ96BD5 680 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 SSX3Q99909 188 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 C19orf24Q9BVV8 132 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 MMP28Q9H239 520 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 C12orf4Q9NQ89 552 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 DPM3Q9P2X0 92 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 GNG12Q9UBI6 72 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 PSG11Q9UQ72 335 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 AMMECR1Q9Y4X0 333 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 HILPDAQ9Y5L2 63 aa15.93■□□□□ 0.14
SHKBP1-214ENST00000597396 LEUTXA8MZ59 168 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 J3QR06 171 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 CEACAM3P40198 252 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 ACTG1P63261 375 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 ARFRP1Q13795 201 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 ARL6IP1Q15041 203 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 CTF1Q16619 201 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 LDLRAD2Q5SZI1 272 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 ZNF880Q6PDB4 577 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 CLVS1Q8IUQ0 354 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 DYNAPQ8N1N2 210 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 OR5R1Q8NH85 324 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 SLC25A46Q96AG3 418 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 CHIAQ9BZP6 476 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 ABCB10Q9NRK6 738 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 MGAT4AQ9UM21 535 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 SPATA2Q9UM82 520 aa15.92■□□□□ 0.14
SHKBP1-214ENST00000597396 TRBV6-6A0A0A6YYG2 114 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 SERPINE3A8MV23 424 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 H3BUX3 64 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 MFNGO00587 321 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 LOXL3P58215 753 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 HMGN3Q15651 99 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 C16orf87Q6PH81 154 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 OR10V1Q8NGI7 309 aa15.91■□□□□ 0.14
SHKBP1-214ENST00000597396 GALMQ96C23 342 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms