RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FCER2P06734 321 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 IL7P13232 177 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 USF1P22415 310 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 TAS2R46P59540 309 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ARPC4P59998 168 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 SEC61A1P61619 476 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 HLA-DRB3P79483 266 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ACTBL2Q562R1 376 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 CD276Q5ZPR3 534 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF841Q6ZN19 808 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 HOGA1Q86XE5 327 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 GAPTQ8N292 157 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 TOMM5Q8N4H5 51 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 GVQW1Q8N7I0 195 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF565Q8N9K5 539 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 BEST4Q8NFU0 473 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 MRGPRDQ8TDS7 321 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 MAFIPQ8WZ33 124 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 TRIM63Q969Q1 353 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 NCOR1P1Q9H4R4 102 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 Q9N2K0 584 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 RAB9BQ9NP90 201 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF107Q9UII5 783 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF736B4DX44 427 aaPredicted RBP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 SPINT2O43291 252 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 ORC5O43913 435 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 FOXH1O75593 365 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 UPK1BO75841 260 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 TBPP20226 339 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 FAUP35544 74 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 TAS2R19P59542 299 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 BAK1Q16611 211 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 CR1LQ2VPA4 569 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 BTN2A1Q7KYR7 527 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF554Q86TJ5 538 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 OR13A1Q8NGR1 328 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 DCTN5Q9BTE1 182 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 GAL3ST2Q9H3Q3 398 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 C19orf12Q9NSK7 152 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 MBNL3Q9NUK0 354 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 KLK11Q9UBX7 282 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 ANXA10Q9UJ72 324 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 ANAPC10Q9UM13 185 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 UBE2J1Q9Y385 318 aaPredicted RBP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 RBMX2Q9Y388 322 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 LINC00312Q9Y6C7 94 aa9.93□□□□□ -0.82
SHKBP1-213ENST00000597325 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 A8MXK9 166 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 FABP7O15540 132 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 ENSAO43768 121 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 LANCL1O43813 399 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 FCN3O75636 299 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 RCC1P18754 421 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 GZMHP20718 246 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 HLA-DMAP28067 261 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 OR3A3P47888 321 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 DEFA1P59665 94 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 DEFA3P59666 94 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 LMO4P61968 165 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 DCTN2Q13561 401 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 OR52W1Q6IF63 320 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF880Q6PDB4 577 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 Q6ZS49 121 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 TMEM229BQ8NBD8 167 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 SNAPC3Q92966 411 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 TAF9BQ9HBM6 251 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 PALMDQ9NP74 551 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 OPN4Q9UHM6 478 aa9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-213ENST00000597325 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 ANKRD20A5PA0PJZ0 165 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 MEX3AA1L020 520 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF729A6NN14 1252 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 CENPXA8MT69 81 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 C12orf77C9JDV5 145 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 LIPFP07098 398 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 NAT1P18440 290 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 IL2RGP31785 369 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 SSTR5P35346 364 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 LCN2P80188 198 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 MEF2DQ14814 521 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 HMGN3Q15651 99 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 AWAT1Q58HT5 328 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 RNASE10Q5GAN6 216 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 Q6ZPA2 131 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 OR4A4PQ8NGN8 299 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 C8orf46Q8TAG6 207 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 FAM216AQ8WUB2 273 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms