RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 DPPA5A6NC42 116 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 TMEM235A6NFC5 223 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 F2RL2O00254 374 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 HPGDSO60760 199 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 HBZP02008 142 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 EIF4EP06730 217 aaKnown RBP11.71□□□□□ -0.53
VRK3-213ENST00000597215 FCGR3AP08637 254 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 CD34P28906 385 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 TALDO1P37837 337 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 MNDAP41218 407 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 GNG2P59768 71 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 PITPNAQ00169 270 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 HMGN3Q15651 99 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 MIDNQ504T8 468 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 TMEM69Q5SWH9 247 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 BAIAP2L2Q6UXY1 529 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 PRR18Q8N4B5 295 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 OR52M1Q8NGK5 317 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 UBALD1Q8TB05 177 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 Q9N2K0 584 aa11.71□□□□□ -0.53
VRK3-213ENST00000597215 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 SDCBPO00560 298 aaPredicted RBP11.7□□□□□ -0.54
VRK3-213ENST00000597215 ARG1P05089 322 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 DTYMKP23919 212 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 SAA4P35542 130 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 LGALS4P56470 323 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 HLA-DRB3P79483 266 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 ZNF626Q68DY1 528 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 Q6ZPA2 131 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 GALMQ96C23 342 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 DGCR14Q96DF8 476 aaKnown RBP11.7□□□□□ -0.54
VRK3-213ENST00000597215 SLC6A7Q99884 636 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 DCUN1D5Q9BTE7 237 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 GFOD1Q9NXC2 390 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 ADAM30Q9UKF2 790 aa11.7□□□□□ -0.54
VRK3-213ENST00000597215 ELF5Q9UKW6 265 aaPredicted RBP11.7□□□□□ -0.54
VRK3-213ENST00000597215 MEIOCA2RUB1 952 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 FAM172BPA6NC97 362 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 RGS5O15539 181 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 IFNA2P01563 188 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 MELTFP08582 738 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 ELK1P19419 428 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 TAS2R20P59543 309 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 IZUMO1Q8IYV9 350 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 BCL6BQ8N143 479 aaPredicted RBP11.69□□□□□ -0.54
VRK3-213ENST00000597215 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
VRK3-213ENST00000597215 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 SLIRPQ9GZT3 109 aaKnown RBP11.69□□□□□ -0.54
VRK3-213ENST00000597215 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 AUNIPQ9H7T9 357 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 ZNF286AQ9HBT8 521 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 GNG12Q9UBI6 72 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 TBL2Q9Y4P3 447 aaKnown RBP11.69□□□□□ -0.54
VRK3-213ENST00000597215 MXRA5Q9NR99 2828 aa11.69□□□□□ -0.54
VRK3-213ENST00000597215 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
VRK3-213ENST00000597215 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 TOR1AO14656 332 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 PRRX1P54821 245 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 LOXL3P58215 753 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 HTD2P86397 168 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 SRSF7Q16629 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
VRK3-213ENST00000597215 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 Q3ZCU0 254 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 STEAP3Q658P3 488 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 RBMS3Q6XE24 437 aaKnown RBP11.68□□□□□ -0.54
VRK3-213ENST00000597215 DTX3Q8N9I9 347 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 OR9G1Q8NH87 305 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 MCFD2Q8NI22 146 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 IL1F10Q8WWZ1 152 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
VRK3-213ENST00000597215 OR2S2Q9NQN1 319 aa11.68□□□□□ -0.54
VRK3-213ENST00000597215 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 CTDSP2O14595 271 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 RGS11O94810 467 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 IGLV1-47P01700 117 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 FBP1P09467 338 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 GNG10P50151 68 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 MINOS1Q5TGZ0 78 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 Q6ZS49 121 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 LAX1Q8IWV1 398 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
VRK3-213ENST00000597215 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms