RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 MED22Q15528 200 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 TPTE2P1Q5T6R2 138 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 FAM27D1Q5T7N8 215 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 ZNF529Q6P280 563 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 ZNF596Q8TC21 504 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 CORO2AQ92828 525 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 OR14A2Q96R54 314 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 CCDC90BQ9GZT6 254 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 ISYNA1Q9NPH2 558 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 ZNF729A6NN14 1252 aaPredicted RBP12.07□□□□□ -0.48
LIG1-214ENST00000597146 LEUTXA8MZ59 168 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 CEACAM3P40198 252 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 GLP1RP43220 463 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 AQP4P55087 323 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 RBM39Q14498 530 aaKnown RBP12.07□□□□□ -0.48
LIG1-214ENST00000597146 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 HEPN1Q6WQI6 88 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 MS4A15Q8N5U1 240 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 OR51T1Q8NGJ9 327 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 FBLIM1Q8WUP2 373 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 CREB3L1Q96BA8 519 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 DPCDQ9BVM2 203 aaPredicted RBP12.07□□□□□ -0.48
LIG1-214ENST00000597146 KIF25Q9UIL4 384 aa12.07□□□□□ -0.48
LIG1-214ENST00000597146 MRPS28Q9Y2Q9 187 aaKnown RBP12.07□□□□□ -0.48
LIG1-214ENST00000597146 LDLRAD4O15165 306 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 GPX5O75715 221 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 IGLV1-47P01700 117 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 CSN2P05814 226 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 HSMCR30P0CW71 290 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 GP9P14770 177 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 MYF6P23409 242 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 GDNFP39905 211 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 KCNJ3P48549 501 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 HSPA13P48723 471 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 SPHARQ15513 63 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIG1-214ENST00000597146 LTC4SQ16873 150 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 ACSM3Q53FZ2 586 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 AWAT2Q6E213 333 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 GLIPR1L1Q6UWM5 242 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 DRAM1Q8N682 238 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 NRG4Q8WWG1 115 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 MUL1Q969V5 352 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 TMED9Q9BVK6 235 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
LIG1-214ENST00000597146 TRAV8-7A0A075B6U6 113 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 TRAV24A0A0B4J272 114 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 KBTBD11-OT1A0A1B0GTJ5 212 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 MCRIP1C9JLW8 97 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 IGHG2P01859 326 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 CD1AP06126 327 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 IGFBP3P17936 291 aaPredicted RBP12.05□□□□□ -0.48
LIG1-214ENST00000597146 GZMHP20718 246 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 CDX1P47902 265 aaPredicted RBP12.05□□□□□ -0.48
LIG1-214ENST00000597146 INSL3P51460 131 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 RBM11P57052 281 aaKnown RBP12.05□□□□□ -0.48
LIG1-214ENST00000597146 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
LIG1-214ENST00000597146 UTF1Q5T230 341 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 LINC00596Q86U02 117 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 FOXRED2Q8IWF2 684 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 CDH26Q8IXH8 852 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 OR56B4Q8NH76 319 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 COQ2Q96H96 371 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 PPIL3Q9H2H8 161 aaKnown RBP12.05□□□□□ -0.48
LIG1-214ENST00000597146 IL36GQ9NZH8 169 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 TNCP24821 2201 aa12.05□□□□□ -0.48
LIG1-214ENST00000597146 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 BUB1B-PAK6H3BSN5 160 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 CCRL2O00421 344 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 GEMIN2O14893 280 aaKnown RBP12.04□□□□□ -0.48
LIG1-214ENST00000597146 RGS10O43665 173 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 CRTAPO75718 401 aaPredicted RBP12.04□□□□□ -0.48
LIG1-214ENST00000597146 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 MNDAP41218 407 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 RPS11P62280 158 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIG1-214ENST00000597146 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 CEACAM19Q7Z692 300 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 OR11H1Q8NG94 326 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 RFESDQ8TAC1 157 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 C4orf3Q8WVX3 66 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 DDB2Q92466 427 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
LIG1-214ENST00000597146 DERL3Q96Q80 235 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 FKBP14Q9NWM8 211 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 CALYQ9NYX4 217 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms